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SCNpilot_cont_500_bf_scaffold_4937

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4937_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(169..993)
DNA (825bp) protein (275aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Methionine aminopeptidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR25_NITHX
SCNpilot_cont_500_bf_scaffold_4937_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1380..2531
DNA (1152bp) protein (384aa)
Potassium/proton antiporter, CPA1 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR24_NITHX
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A
Potassium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABE61323.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4937_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2480..3025
DNA (546bp) protein (182aa)
Potassium/proton antiporter, CPA1 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR24_NITHX
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A
Potassium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABE61323.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4937_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3164..3829)
DNA (666bp) protein (222aa)
molybdate ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdate-transporting ATPase {ECO:0000256|SAAS:SAAS00055222}; EC=3.6.3.29 {ECO:0000256|SAAS:SAAS00055222};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Molybdate ABC transporter, ATP-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR23_NITHX
SCNpilot_cont_500_bf_scaffold_4937_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3832..4527)
DNA (696bp) protein (232aa)
Molybdate ABC transporter, permease protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS20_9BRAD
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EAQ37221.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
modB; molybdate ABC transporter permease protein; K02018 molybdate transport system permease protein
SCNpilot_cont_500_bf_scaffold_4937_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4854..5678)
DNA (825bp) protein (275aa)
Molybdenum ABC transporter, periplasmic binding protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS18_9BRAD rbh
Molybdenum ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EAQ37219.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_4937_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5856..6356)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4U6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52976.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4937_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6791..7753)
DNA (963bp) protein (321aa)
mepA; penicillin-insensitive murein endopeptidase; K07261 penicillin-insensitive murein endopeptidase [EC:3.4.24.-]
Murein endopeptidase, Metallo peptidase, MEROPS family M74 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR20_NITHX
Murein endopeptidase, Metallo peptidase, MEROPS family M74 {ECO:0000313|EMBL:ABE61327.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4937_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7895..8266)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37217.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4937_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8380..9945)
DNA (1566bp) protein (522aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Elongation factor 4 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TCN5_9BRAD
GTP-binding protein LepA; K03596 GTP-binding protein LepA
SCNpilot_cont_500_bf_scaffold_4937_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10187..10531)
DNA (345bp) protein (115aa)
HPrNtr n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR18_NITHX
hypothetical protein; K11189 phosphocarrier protein
HPrNtr {ECO:0000313|EMBL:ABE61329.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4937_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10528..10647)
DNA (120bp) protein (40aa)
PTS system fructose subfamily transporter subunit IIA; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
PTS system fructose subfamily IIA component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVS9_NITWN
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:ABA03612.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_4937_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11020..11496)
DNA (477bp) protein (159aa)
Hpr(Ser) kinase/phosphatase {ECO:0000313|EMBL:ABE61331.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABE61331.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Hpr(Ser) kinase/phosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR16_NITHX
HPr kinase
SCNpilot_cont_500_bf_scaffold_4937_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11493..13307)
DNA (1815bp) protein (605aa)
sensor signal transduction histidine kinase; K14980 two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR15_NITHX
SCNpilot_cont_500_bf_scaffold_4937_15
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13516..14001)
DNA (486bp) protein (162aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVS6_NITWN
transcriptional regulatory protein; K14981 two-component system, OmpR family, response regulator ChvI
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABA03615.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_4937_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14348..15091
DNA (744bp) protein (248aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR13_NITHX
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07226 hypothetical protein
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein {ECO:0000313|EMBL:ABE61334.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4937_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15137..16753
DNA (1617bp) protein (539aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] rbh
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000255|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000255|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000255|HAMAP-Rule:MF_00453};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PCKA_NITHX rbh
SCNpilot_cont_500_bf_scaffold_4937_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17083..17976
DNA (894bp) protein (298aa)
Beta-lactamase (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6] rbh
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Beta-lactamase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR11_NITHX rbh
SCNpilot_cont_500_bf_scaffold_4937_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18017..18658)
DNA (642bp) protein (214aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
arginase; K01476 arginase [EC:3.5.3.1]
Arginase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS27_9BRAD
SCNpilot_cont_500_bf_scaffold_4937_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18714..18902)
DNA (189bp) protein (63aa)
arginase; K01476 arginase [EC:3.5.3.1]
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Arginase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR10_NITHX
SCNpilot_cont_500_bf_scaffold_4937_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18899..20053)
DNA (1155bp) protein (385aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR09_NITHX
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module {ECO:0000313|EMBL:ABE61338.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 21 items

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