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SCNpilot_cont_500_bf_scaffold_5502

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5502_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..238)
DNA (237bp) protein (79aa)
hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase Nham_3637 {ECO:0000255|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000255|HAMAP-Rule:MF_00657};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PKHD-type hydroxylase Nham_3637 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y3637_NITHX
SCNpilot_cont_500_bf_scaffold_5502_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322..2436)
DNA (2115bp) protein (705aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHD1_NITHX rbh
TonB-dependent siderophore receptor rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABE64366.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3077..4135
DNA (1059bp) protein (353aa)
Outer membrane transport energization protein ExbB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHD0_NITHX rbh
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB rbh
Outer membrane transport energization protein ExbB {ECO:0000313|EMBL:ABE64367.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4141..4593
DNA (453bp) protein (151aa)
Outer membrane transport energization protein ExbD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC9_NITHX
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:ABE64368.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4590..5126
DNA (537bp) protein (179aa)
Outer membrane transport energization protein TonB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC8_NITHX
TonB-like; K03832 periplasmic protein TonB
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABE64369.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5259..7670
DNA (2412bp) protein (804aa)
Protein translocase subunit SecA 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SECA2_NITHX
Protein translocase subunit SecA 2 {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SecA DEAD-like protein
SCNpilot_cont_500_bf_scaffold_5502_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7971..9176
DNA (1206bp) protein (402aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC4_NITHX rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE64373.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9362..10225
DNA (864bp) protein (288aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC3_NITHX
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABE64374.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10222..11169
DNA (948bp) protein (316aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC2_NITHX
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE64375.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11166..11828
DNA (663bp) protein (221aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC1_NITHX
ABC transporter
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABE64376.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11825..12556
DNA (732bp) protein (244aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHC0_NITHX rbh
ABC transporter rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABE64377.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12667..13719)
DNA (1053bp) protein (351aa)
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
tRNA-dihydrouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHB9_NITHX
SCNpilot_cont_500_bf_scaffold_5502_13
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14268..14810)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN04_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06337.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_5502_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14862..15176)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN03_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06338.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_5502_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15572..16198
DNA (627bp) protein (209aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EG57_9RHIZ
Regulatory protein LuxR {ECO:0000313|EMBL:CDX36374.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5502_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16220..17455)
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QBZ4_RHOPT
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACF02181.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_5502_17
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17460..17903)
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNK5_NITWN
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABA06136.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_5502_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18013..18471
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHA3_NITHX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABE64394.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18606..19646)
DNA (1041bp) protein (347aa)
Beta-lactamase-like protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV40_9BRAD rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:EAQ36181.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
beta-lactamase-like rbh
SCNpilot_cont_500_bf_scaffold_5502_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19735..20265)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHA1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64396.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_21
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20252..20476)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV39_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36180.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5502_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20667..21122)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH99_NITHX
hypothetical protein; K09004 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64398.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21128..22801)
DNA (1674bp) protein (558aa)
Sulfate thiol esterase SoxB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH98_NITHX
twin-arginine translocation pathway signal
Sulfate thiol esterase SoxB {ECO:0000313|EMBL:ABE64399.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5502_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22960..23079)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH97_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64400.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 24 items

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