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SCNpilot_cont_500_bf_scaffold_2517

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2517_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQY9_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05302.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2517_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317..844)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X074_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ34365.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2517_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(844..2028)
DNA (1185bp) protein (395aa)
PepSY-associated membrane protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X073_9BRAD rbh
PepSY-associated membrane protein {ECO:0000313|EMBL:EAQ34364.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
propeptide PepSY amd peptidase M4 rbh
SCNpilot_cont_500_bf_scaffold_2517_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2208..4319)
DNA (2112bp) protein (704aa)
TonB-denpendent receptor n=1 Tax=Pseudomonas psychrophila RepID=UPI0002FE1AA0
TonB-denpendent receptor {ECO:0000313|EMBL:ERH56793.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
ferric alcaligin siderophore receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_500_bf_scaffold_2517_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..5734)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036014BE
Uncharacterized protein {ECO:0000313|EMBL:KDP73371.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
FecR protein; K07165 transmembrane sensor
SCNpilot_cont_500_bf_scaffold_2517_6
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5891..6406)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000367BAA5
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABL71062.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_cont_500_bf_scaffold_2517_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7168..9162)
DNA (1995bp) protein (665aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X080_9BRAD
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EAQ34362.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_500_bf_scaffold_2517_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9294..10277)
DNA (984bp) protein (328aa)
Anti-FecI sigma factor, FecR n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU68_METTR rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EUB98242.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
SCNpilot_cont_500_bf_scaffold_2517_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10378..10893)
DNA (516bp) protein (172aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU69_METTR
Fec I like protein {ECO:0000313|EMBL:EKF18328.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
fec I like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_2517_10
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11328..11798)
DNA (471bp) protein (157aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSZ2_NITWN
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABA04599.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2517_11
unknown

Not on your lists

12243..12851
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2517_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12744..13673)
DNA (930bp) protein (310aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSZ2_NITWN
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABA04599.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2517_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14013..15005)
DNA (993bp) protein (331aa)
Probable FecR, iron siderophore sensor protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X079_9BRAD
FecR, iron siderophore sensor protein; K07165 transmembrane sensor
Probable FecR, iron siderophore sensor protein {ECO:0000313|EMBL:EAQ34361.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_2517_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15072..15602)
DNA (531bp) protein (177aa)
Fec I like protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQY2_NITWN rbh
fec I like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
Fec I like protein {ECO:0000313|EMBL:ABA05309.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2517_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..17979)
DNA (2112bp) protein (704aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Catalase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV15_9BRAD rbh
catalase
SCNpilot_cont_500_bf_scaffold_2517_16
unknown

Not on your lists

18982..19398
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2517_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19564..19779)
DNA (216bp) protein (72aa)
Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IG90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59724.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2517_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20686..20904)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG20_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64827.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2517_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21396..23450)
DNA (2055bp) protein (685aa)
Putative glycosyl transferase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIM9_9BRAD
Putative glycosyl transferase {ECO:0000313|EMBL:EGP09120.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
glycosyl transferase family protein rbh
SCNpilot_cont_500_bf_scaffold_2517_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23534..24469
DNA (936bp) protein (312aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP5_NITHX rbh
extracellular solute-binding protein rbh
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:ABE61102.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2517_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24514..26220
DNA (1707bp) protein (569aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] rbh
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Lysine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP6_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2517_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26557..27075
DNA (519bp) protein (173aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP7_NITHX
ErfK/YbiS/YcfS/YnhG
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABE61100.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2517_23
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27137..27475)
DNA (339bp) protein (113aa)
Nuclease (SNase-like protein) n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWB9_NITWN
nuclease
Nuclease (SNase-like protein) {ECO:0000313|EMBL:ABA03422.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2517_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27722..27946)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61099.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 24 items

View Taxonomy