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SCNpilot_cont_500_bf_scaffold_2698

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2698_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1385)
DNA (1383bp) protein (461aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS2_NITHX
polysaccharide biosynthesis protein CapD; K13013 O-antigen biosynthesis protein WbqV
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ABE62125.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2698_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1447..2916)
DNA (1470bp) protein (490aa)
bifunctional ADP-heptose synthase; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
Bifunctional protein HldE {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.1.167 {ECO:0000255|HAMAP-Rule:MF_01603};; D-beta-D-heptose 7-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_01603}; D-glycero-beta-D-manno-heptose-7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.7.70 {ECO:0000255|HAMAP-Rule:MF_01603};; D-glycero-beta-D-ma
Bifunctional protein HldE n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=HLDE_NITHX
SCNpilot_cont_500_bf_scaffold_2698_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2964..3944)
DNA (981bp) protein (327aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] rbh
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS4_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2698_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4445..5518
DNA (1074bp) protein (358aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] rbh
Lipopolysaccharide heptosyltransferase II n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVC7_9BRAD rbh
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EAQ36062.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_2698_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5589..6176
DNA (588bp) protein (196aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] rbh
Phosphoheptose isomerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVD0_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_2698_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6173..6724
DNA (552bp) protein (184aa)
histidinol-phosphate phosphatase (EC:3.1.3.15); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] rbh
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVC9_9BRAD
Histidinol-phosphate phosphatase {ECO:0000313|EMBL:EAQ36060.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_2698_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6721..7668)
DNA (948bp) protein (316aa)
lipopolysaccharide heptosyltransferase I; K02841 heptosyltransferase I [EC:2.4.-.-] rbh
Lipopolysaccharide heptosyltransferase I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS8_NITHX rbh
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:ABE62119.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2698_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..8869
DNA (1011bp) protein (337aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ABE62118.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABE62118.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
UDP-galactose 4-epimerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS9_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2698_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8991..10793
DNA (1803bp) protein (601aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNT0_NITHX rbh
ABC transporter related protein {ECO:0000313|EMBL:ABE62117.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_cont_500_bf_scaffold_2698_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10862..11563
DNA (702bp) protein (234aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNT1_NITHX rbh
fumarylacetoacetate (FAA) hydrolase rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ABE62116.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2698_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11723..12685)
DNA (963bp) protein (321aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=DNLJ_NITHX
Displaying 11 items

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