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SCNpilot_cont_500_bf_scaffold_2933

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2933_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..315
DNA (315bp) protein (105aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5-related N-acetyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRK9_NITHX
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABE61138.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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503..1426
DNA (924bp) protein (308aa)
heat shock protein HtpX (EC:3.4.24.84); K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog {ECO:0000255|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_00188};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Protease HtpX homolog n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=HTPX_NITWN
SCNpilot_cont_500_bf_scaffold_2933_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1583..2668
DNA (1086bp) protein (362aa)
UPI0003CE8CF1 related cluster n=1 Tax=unknown RepID=UPI0003CE8CF1 rbh
Flagellar motor protein MotB {ECO:0000313|EMBL:ESY72356.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
OmpA/MotB domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_2933_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2976..5801
DNA (2826bp) protein (942aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABE61135.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE61135.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL2_NITHX rbh
PAS/PAC sensor hybrid histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_2933_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5981..6397
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61134.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6471..7151)
DNA (681bp) protein (227aa)
Beta-lactamase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL4_NITHX
beta-lactamase-like
Beta-lactamase-like protein {ECO:0000313|EMBL:ABE61133.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7253..7744
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL5_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61132.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7940..8494)
DNA (555bp) protein (185aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL6_NITHX rbh
response regulator receiver domain-containing protein; K15012 two-component system, response regulator RegA rbh
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABE61131.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8588..9928)
DNA (1341bp) protein (447aa)
histidine kinase; K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Histidine kinase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWG3_NITWN
SCNpilot_cont_500_bf_scaffold_2933_10
unknown

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comp(9925..10068)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2933_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10248..11582
DNA (1335bp) protein (445aa)
polyhydroxyalkanoate depolymerase; K05973 poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] rbh
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL8_NITHX rbh
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:ABE61129.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11805..12590
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL9_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61128.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12741..13817)
DNA (1077bp) protein (359aa)
penicillin-binding protein 1A (EC:2.4.1.129)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABE61127.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABE61127.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Penicillin-binding protein 1A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM0_NITHX
SCNpilot_cont_500_bf_scaffold_2933_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13814..14473)
DNA (660bp) protein (220aa)
penicillin-binding protein 1A (EC:2.4.1.129)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABE61127.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABE61127.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Penicillin-binding protein 1A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM0_NITHX
SCNpilot_cont_500_bf_scaffold_2933_15
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15074..16330)
DNA (1257bp) protein (419aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000364DB99
putative branched-chain amino acid ABC transporter periplasmic binding protein rbh
Putative branched-chain amino acid ABC transporter periplasmic binding protein {ECO:0000313|EMBL:BAM93081.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_2933_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16424..19219)
DNA (2796bp) protein (932aa)
PII uridylyl-transferase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000255|HAMAP-Rule:MF_00277}; Short=UTase/UR {ECO:0000255|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000255|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000255|HAMAP-Rule:MF_00277}; Includes:; [Protein-PII] uridylyltransferase {ECO:0000255|HAMAP-Rule:MF_00277}; Short=PII uridylyltransferase {ECO:0000255|HAMAP-Rule:MF_00277};; Short=UTase {ECO:0000255|HAMAP-Rule:MF_00277};; EC=2.7.7.59 {ECO:000
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLND_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2933_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19444..20418
DNA (975bp) protein (325aa)
Aliphatic sulfonates family ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZL1_9BRAD
Sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC61467.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter substrate-binding protein; K15553 sulfonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2933_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20510..21271
DNA (762bp) protein (254aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QIP9_RHOPT
ABC transporter permease {ECO:0000313|EMBL:KJC61489.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter inner membrane protein; K15554 sulfonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_2933_19
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21271..22056
DNA (786bp) protein (262aa)
ABC transporter ATP-binding protein; K15555 sulfonate transport system ATP-binding protein [EC:3.6.3.-] rbh
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037DBBE8 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EJZ35668.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_500_bf_scaffold_2933_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22113..22595
DNA (483bp) protein (161aa)
OsmC-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM2_NITHX
OsmC-like protein
OsmC-like protein {ECO:0000313|EMBL:ABE61125.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22776..23780
DNA (1005bp) protein (335aa)
Hsp33 protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM3_NITHX
hslO; Hsp33-like chaperonin; K04083 molecular chaperone Hsp33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23814..24209)
DNA (396bp) protein (132aa)
Protein ApaG n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSL5_9BRAD
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
apaG; ApaG protein; K06195 ApaG protein
SCNpilot_cont_500_bf_scaffold_2933_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24531..25775
DNA (1245bp) protein (415aa)
Acyltransferase 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM5_NITHX
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABE61122.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25772..26536
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61121.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26533..27450
DNA (918bp) protein (306aa)
Lipolytic enzyme, G-D-S-L n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM7_NITHX rbh
lipolytic enzyme, G-D-S-L rbh
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:ABE61120.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2933_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27762..28361)
DNA (600bp) protein (200aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:ABE61119.1}; EC=2.5.1.48 {ECO:0000313|EMBL:ABE61119.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
O-succinylhomoserine sulfhydrylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM8_NITHX
Displaying 26 items

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