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SCNpilot_cont_500_bf_scaffold_16852

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_16852_1
unknown

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comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_16852_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(139..1029)
DNA (891bp) protein (297aa)
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=DAPA_NITHX
SCNpilot_cont_500_bf_scaffold_16852_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1259..3064
DNA (1806bp) protein (602aa)
lytic transglycosylase, catalytic; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] rbh
Lytic transglycosylase, catalytic n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL42_NITHX rbh
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABE63055.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_16852_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3055..3444
DNA (390bp) protein (130aa)
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Lytic transglycosylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SRA1_NITWN
Lytic transglycosylase {ECO:0000313|EMBL:ABA05190.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_16852_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4307..5590)
DNA (1284bp) protein (428aa)
Putative porin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL40_NITHX
porin
Putative porin {ECO:0000313|EMBL:ABE63057.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_16852_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6072..7565)
DNA (1494bp) protein (498aa)
Putative porin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ75_NITHX rbh
porin rbh
Putative porin {ECO:0000313|EMBL:ABE63722.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_16852_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8336..9139)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI0003677690
hypothetical protein
Hypothethical protein {ECO:0000313|EMBL:CBJ50989.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
Displaying 7 items

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