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SCNpilot_cont_500_bf_scaffold_267

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_267_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..176
DNA (174bp) protein (58aa)
Sulfide-quinone oxidoreductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FZ7_MESSB
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGD96967.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
sulfide-quinone reductase
SCNpilot_cont_500_bf_scaffold_267_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207..410
DNA (204bp) protein (68aa)
sulfurtransferase n=1 Tax=Martelella mediterranea RepID=UPI00036DD547
Sulfurtransferase {ECO:0000313|EMBL:KGD96968.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_267_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

477..4619
DNA (4143bp) protein (1381aa)
Acriflavin resistance protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1B0_9RHIZ rbh
Acriflavin resistance protein {ECO:0000313|EMBL:AGK56743.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
acriflavin resistance protein rbh
SCNpilot_cont_500_bf_scaffold_267_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4782..5579)
DNA (798bp) protein (266aa)
UspA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIU6_NITHX
hypothetical protein
UspA {ECO:0000313|EMBL:ABE63851.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_267_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5806..7362)
DNA (1557bp) protein (519aa)
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK6_NITHX
hypothetical protein
Peptidoglycan transpeptidase, ErfK-YbiS-YhnG family {ECO:0000313|EMBL:ABE64641.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_267_trna_2
unknown

Not on your lists

comp(8026..8110)
DNA (85bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_267_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8253..9107
DNA (855bp) protein (285aa)
RNA methyltransferase TrmH, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] rbh
RNA methyltransferase TrmH, group 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF5_NITHX rbh
RNA methyltransferase TrmH, group 3 {ECO:0000313|EMBL:ABE63292.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_267_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9277..9819)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF4_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63293.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_267_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9860..10345)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63294.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_267_9
unknown

Not on your lists

comp(10512..10643)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_267_10
unknown

Not on your lists

comp(10782..10961)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_267_11
unknown

Not on your lists

comp(11051..11236)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_267_trna_1
unknown

Not on your lists

comp(11505..11576)
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_267_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12015..12722
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAQ2_MESOW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH88812.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_267_13
unknown

Not on your lists

comp(13178..14212)
DNA (1035bp) protein (345aa)
AraC family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B56F92 rbh
Helix-turn-helix domain-containing protein AraC type {ECO:0000313|EMBL:CPR18095.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_267_14
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14355..14681
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=V7GIG7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX94576.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_267_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14727..15002
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDJ6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39636.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_267_16
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15129..15887
DNA (759bp) protein (253aa)
Membrane protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDJ0_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESZ54758.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
Conserved membrane protein of unknown function
SCNpilot_cont_500_bf_scaffold_267_17
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16754..18196)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TP21_TISMK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK54509.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_267_18
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18300..19736)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAX7_PELHB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEQ53613.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_500_bf_scaffold_267_19
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19800..23126)
DNA (3327bp) protein (1109aa)
UPI0003CE6BE0 related cluster n=1 Tax=unknown RepID=UPI0003CE6BE0 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY27443.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_267_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23130..26024)
DNA (2895bp) protein (965aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZ68_AZOBR rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_267_21
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26021..26638)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036E5BDD
TIGR02646 family protein {ECO:0000313|EMBL:EJF51926.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_267_22
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26635..28047)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036F33E5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD03229.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_500_bf_scaffold_267_23
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28044..31631)
DNA (3588bp) protein (1196aa)
Superfamily II DNA/RNA helicase, SNF2 family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXZ2_9PROT rbh
Superfamily II DNA/RNA helicase, SNF2 family protein {ECO:0000313|EMBL:EDP62638.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
superfamily II DNA/RNA helicase, SNF2 family protein rbh
SCNpilot_cont_500_bf_scaffold_267_24
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31632..32510)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGM5_METPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB81258.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_500_bf_scaffold_267_25
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32692..34518)
DNA (1827bp) protein (609aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
UvrD/REP helicase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGH6_METPB rbh
SCNpilot_cont_500_bf_scaffold_267_26
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34530..36320)
DNA (1791bp) protein (597aa)
ATP-dependent endonuclease family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJT4_XANP2 rbh
ATP-dependent endonuclease family protein {ECO:0000313|EMBL:ABS68277.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
ATP-dependent endonuclease family protein rbh
SCNpilot_cont_500_bf_scaffold_267_27
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36342..36719)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL47_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ36891.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_500_bf_scaffold_267_28
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36858..37160)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00036D5247
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ36892.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Displaying items 1-30 of 110 in total

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