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SCNpilot_cont_500_bf_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_289_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1805)
DNA (1803bp) protein (601aa)
AsmA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHG0_NITHX rbh
AsmA; K07289 AsmA protein rbh
AsmA {ECO:0000313|EMBL:ABE64337.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_289_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2084..2842
DNA (759bp) protein (253aa)
Transcriptional regulatory protein, Crp family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0E1_9BRAD
Transcriptional regulatory protein, Crp family protein {ECO:0000313|EMBL:EAQ34294.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Crp/Fnr family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_289_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2736..5858)
DNA (3123bp) protein (1041aa)
Acriflavin resistance protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF9_NITHX rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ABE64338.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
acriflavin resistance protein rbh
SCNpilot_cont_500_bf_scaffold_289_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5858..6697)
DNA (840bp) protein (280aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF8_NITHX
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE64339.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_289_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..7091)
DNA (303bp) protein (101aa)
Peptidase C14 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0E4_9BRAD
Peptidase C14 {ECO:0000313|EMBL:EAQ34297.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
peptidase C14
SCNpilot_cont_500_bf_scaffold_289_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7232..8146)
DNA (915bp) protein (305aa)
Peptidase C14 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0E4_9BRAD
peptidase C14
Peptidase C14 {ECO:0000313|EMBL:EAQ34297.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_289_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8338..8976)
DNA (639bp) protein (213aa)
OmpA/MotB n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0D7_9BRAD rbh
OmpA/MotB {ECO:0000313|EMBL:EAQ34299.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
OmpA/MotB
SCNpilot_cont_500_bf_scaffold_289_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9363..10361
DNA (999bp) protein (333aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF7_NITHX
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE64340.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_289_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10358..10777
DNA (420bp) protein (140aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF7_NITHX
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE64340.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_289_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10774..11580
DNA (807bp) protein (269aa)
HAD family hydrolase (EC:3.1.3.12); K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] rbh
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Trehalose 6-phosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF6_NITHX rbh
SCNpilot_cont_500_bf_scaffold_289_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11577..13370
DNA (1794bp) protein (598aa)
Glycoside hydrolase 15-related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF5_NITHX
glycoside hydrolase 15-related
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ABE64342.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_289_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13506..15020
DNA (1515bp) protein (505aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Trehalose 6-phosphate synthase {ECO:0000313|EMBL:ABE64343.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ABE64343.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Trehalose 6-phosphate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF4_NITHX
SCNpilot_cont_500_bf_scaffold_289_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15017..15349)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003802B63
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGT74182.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_500_bf_scaffold_289_trna_1
unknown

Not on your lists

15479..15566
DNA (88bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_289_trna_2
unknown

Not on your lists

15604..15683
DNA (80bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_289_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16090..16812)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DCE04
Uncharacterized protein {ECO:0000313|EMBL:EFH09614.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_500_bf_scaffold_289_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17392..20658)
DNA (3267bp) protein (1089aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TY13_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62651.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_289_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20655..22748)
DNA (2094bp) protein (698aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DA21B
Uncharacterized protein {ECO:0000313|EMBL:EDP62652.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
RNA methylase
SCNpilot_cont_500_bf_scaffold_289_17
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22735..24597)
DNA (1863bp) protein (621aa)
DNA methylase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A12F6E
DNA methylase N-4/N-6 {ECO:0000313|EMBL:EDP62653.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
DNA methylase N-4/N-6
SCNpilot_cont_500_bf_scaffold_289_18
unknown

Not on your lists

comp(24629..24841)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B475D8
SCNpilot_cont_500_bf_scaffold_289_19
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24990..25406)
DNA (417bp) protein (139aa)
Bacteriophage-like protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LJU2_9PROT
bacteriophage-like protein
Bacteriophage-like protein {ECO:0000313|EMBL:EKF09305.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
SCNpilot_cont_500_bf_scaffold_289_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25403..26725)
DNA (1323bp) protein (441aa)
Resolvase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TY19_9PROT rbh
DNA-invertase hin {ECO:0000313|EMBL:CEG09701.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
resolvase
SCNpilot_cont_500_bf_scaffold_289_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26722..27168)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JD84_OLICO
Uncharacterized protein {ECO:0000313|EMBL:CEG09700.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_289_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27165..27362)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0R8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97866.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
SCNpilot_cont_500_bf_scaffold_289_23
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27629..27955
DNA (327bp) protein (109aa)
Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0DBK6_9RHOB
Transcriptional regulator {ECO:0000313|EMBL:KGJ18774.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_289_24
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27967..28686
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBK7_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEX12532.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_289_25
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29065..30231
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPV5_RHOCS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACI97491.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_500_bf_scaffold_289_26
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30224..31186
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SR72_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05219.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_289_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31345..31584
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F155_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99122.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_289_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31721..32080
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6K3_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ72485.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying items 1-30 of 119 in total

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