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SCNpilot_cont_500_bf_scaffold_663

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_663_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158..1186
DNA (1029bp) protein (343aa)
Respiratory nitrate reductase chaperone NarJ n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX2_NITHX
nitrate reductase molybdenum cofactor assembly chaperone
Respiratory nitrate reductase chaperone NarJ {ECO:0000313|EMBL:ABE64175.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_663_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1221..1898
DNA (678bp) protein (226aa)
nitrate reductase subunit gamma; K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4] rbh
Respiratory nitrate reductase gamma subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX3_NITHX rbh
Respiratory nitrate reductase gamma subunit {ECO:0000313|EMBL:ABE64174.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_663_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..3411
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX4_NITHX rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE64173.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_663_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3572..4603
DNA (1032bp) protein (344aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHX5_NITHX
C4-dicarboxylate transporter/malic acid transport protein
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ABE64172.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_663_trna_1
unknown

Not on your lists

5344..5417
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_663_5
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..6734
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NKN8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ89925.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
phage integrase family protein
SCNpilot_cont_500_bf_scaffold_663_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7116..8012
DNA (897bp) protein (299aa)
Peptidase M, neutral zinc metallopeptidase, zinc-binding site n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IUP4_POLGS
peptidase M, neutral zinc metallopeptidase, zinc-binding site
Peptidase M, neutral zinc metallopeptidase, zinc-binding site {ECO:0000313|EMBL:ADZ69098.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_500_bf_scaffold_663_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8181..8984
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VIZ2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ11836.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_663_8
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8965..9759
DNA (795bp) protein (265aa)
Phage integrase family protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SR24_XANCT
Phage integrase family protein {ECO:0000313|EMBL:CCP38532.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_663_9
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9841..10053)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPP4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50898.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_663_10
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10672..12402
DNA (1731bp) protein (577aa)
Partitioning protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN71_9PROT
Partitioning protein {ECO:0000313|EMBL:EKF06382.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
partitioning protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_500_bf_scaffold_663_11
unknown

Not on your lists

12790..13344
DNA (555bp) protein (185aa)
hypothetical protein id=12555694 bin=CNBR_ACIDO species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SCNpilot_cont_500_bf_scaffold_663_12
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13403..15058
DNA (1656bp) protein (552aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A6J5_RHIET rbh
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:EGE59912.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
Relaxase/mobilization nuclease family protein rbh
SCNpilot_cont_500_bf_scaffold_663_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15063..18956)
DNA (3894bp) protein (1298aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPQ2_METSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACK50906.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_663_14
unknown

Not on your lists

comp(18956..19252)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_663_15
unknown

Not on your lists

comp(19249..19908)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_663_16
unknown

Not on your lists

comp(19928..20626)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_663_17
unknown

Not on your lists

comp(20671..20802)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_663_18
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20793..21206)
DNA (414bp) protein (138aa)
XRE family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TDC7_RHORU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABC24192.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_500_bf_scaffold_663_19
unknown

Not on your lists

comp(21770..22291)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_663_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22478..22711
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQM0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61477.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_663_21
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22744..22917
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPQ4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50908.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_663_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22936..23430)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QGW4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG59020.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_663_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23446..24180)
DNA (735bp) protein (245aa)
Glutaredoxin n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L821_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KIZ36520.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
glutaredoxin
SCNpilot_cont_500_bf_scaffold_663_24
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24471..24767)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPQ6_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50910.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_663_25
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24809..27682)
DNA (2874bp) protein (958aa)
hypothetical protein id=12555695 bin=CNBR_ACIDO species=Parvularcula bermudensis genus=Parvularcula taxon_order=Parvularculales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
Sporulation protein {ECO:0000313|EMBL:KJY19644.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
AAA family ATPase
SCNpilot_cont_500_bf_scaffold_663_26
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28015..28347
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T3G0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP78470.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. NAS-14.1.;"
SCNpilot_cont_500_bf_scaffold_663_27
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28337..29722
DNA (1386bp) protein (462aa)
Relaxase/mobilization nuclease domain n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y577_NITMU
Jannaschia aquimarina strain GSW-M26 jaqu_contig000066, whole genome shotgun sequence {ECO:0000313|EMBL:KIT14717.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
relaxase/mobilization nuclease domain-containing protein
SCNpilot_cont_500_bf_scaffold_663_28
unknown

Not on your lists

comp(29730..30284)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_663_29
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30306..31139)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B8R4_PARDP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABL71908.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
Displaying items 1-30 of 42 in total

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