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SCNpilot_cont_500_bf_scaffold_1363

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1363_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249..743
DNA (495bp) protein (165aa)
UPF0262 protein NB311A_06868 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT05_9BRAD rbh
UPF0262 protein NB311A_06868 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1363_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

837..1304
DNA (468bp) protein (156aa)
Protein tyrosine phosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRG1_NITHX
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABE61186.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1363_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1616..3940
DNA (2325bp) protein (775aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D7AEF
TonB-denpendent receptor {ECO:0000313|EMBL:ETR78576.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ferrichrome-iron receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_1363_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3949..5106
DNA (1158bp) protein (386aa)
peptidase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B793D rbh
Bradyrhizobium elkanii strain UASWS1015 Contig163, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51817.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
PepSY-associated TM helix domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1363_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5103..5291
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B9100
Uncharacterized protein {ECO:0000313|EMBL:EKS35746.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1363_6
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5413..6036
DNA (624bp) protein (208aa)
Maf-like protein Nwi_0277 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Y277_NITWN rbh
maf; Maf-like protein; K06287 septum formation protein rbh
Maf-like protein Nwi_0277 {ECO:0000255|HAMAP-Rule:MF_00528}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_1363_7
unknown

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comp(6312..6446)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1363_trna_1
unknown

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6348..6420
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1363_8
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6715..7593)
DNA (879bp) protein (293aa)
Antirestriction protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TAX1_PARBH
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:ADM08180.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
SCNpilot_cont_500_bf_scaffold_1363_9
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8023..11343)
DNA (3321bp) protein (1107aa)
ATPase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1L5_9RHIZ rbh
ATPase {ECO:0000313|EMBL:ESZ05294.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
ATPase -like protein; K06922 rbh
SCNpilot_cont_500_bf_scaffold_1363_10
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11363..11926)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GYW7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ05293.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
hypothetical protein; K07445 putative DNA methylase
SCNpilot_cont_500_bf_scaffold_1363_11
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11917..14235)
DNA (2319bp) protein (773aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037CE197 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX54674.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
hypothetical protein; K07445 putative DNA methylase rbh
SCNpilot_cont_500_bf_scaffold_1363_12
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14310..17822)
DNA (3513bp) protein (1171aa)
RNA helicase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1A9_9RHIZ rbh
RNA helicase {ECO:0000313|EMBL:ESZ05292.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
helicase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1363_13
unknown

Not on your lists

comp(17888..18121)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1363_14
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18728..19495)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DB902 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL11843.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_1363_15
unknown

Not on your lists

comp(19789..19986)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1363_16
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20329..21717
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EU87_BRASB rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ37420.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1363_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22585..22770
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWT3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX51867.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1363_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22993..23754
DNA (762bp) protein (254aa)
DNA ligase D n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3E5_9BRAD
DNA ligase D {ECO:0000313|EMBL:EKS32958.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA ligase D
SCNpilot_cont_500_bf_scaffold_1363_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23727..24740
DNA (1014bp) protein (338aa)
DNA ligase D n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3E5_9BRAD
DNA ligase D {ECO:0000313|EMBL:EKS32958.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA ligase D
SCNpilot_cont_500_bf_scaffold_1363_20
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24737..25540
DNA (804bp) protein (268aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRF9_9BRAD
XthA protein {ECO:0000313|EMBL:GAN14578.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_1363_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25675..27591)
DNA (1917bp) protein (639aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGI4_NITHX rbh
ABC transporter; K02471 putative ATP-binding cassette transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ABE64663.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1363_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27906..28076
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRE2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61205.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1363_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28122..28328
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRE2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61205.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 24 items

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