ggKbase home page

SCNpilot_cont_500_bf_scaffold_1520

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1520_1
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..470)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Gluconobacter oxydans H24 RepID=K7T9M9_GLUOY
Integral membrane protein {ECO:0000313|EMBL:GAJ27873.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1520_2
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(467..751)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Mycobacterium yongonense 05-1390 RepID=S4ZI22_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEF98759.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium sp. TKK-01-0059.;"
SCNpilot_cont_500_bf_scaffold_1520_3
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

828..1247
DNA (420bp) protein (140aa)
Putative histidine triad domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYY1_9GAMM
Putative histidine triad domain protein {ECO:0000313|EMBL:EEB78416.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
apaG; diadenosine tetraphosphate hydrolase
SCNpilot_cont_500_bf_scaffold_1520_4
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1466..2413
DNA (948bp) protein (316aa)
Formate hydrogenlyase subunit 4-like protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR5_9BURK
Formate hydrogenlyase subunit 4-like protein {ECO:0000313|EMBL:EGD06345.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1520_5
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2418..3098
DNA (681bp) protein (227aa)
hypothetical protein; K12140 hydrogenase-4 component E [EC:1.-.-.-]
Hydrogenase 4 membrane component (E) n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR4_9BURK rbh
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:EGD06344.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
SCNpilot_cont_500_bf_scaffold_1520_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3095..4585
DNA (1491bp) protein (497aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5]
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ABQ29827.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABQ29827.1};; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
NADH dehydrogenase (Quinone) n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FW45_ACICJ
SCNpilot_cont_500_bf_scaffold_1520_7

Not on your lists

4582..6048
DNA (1467bp) protein (489aa)
NADH dehydrogenase (Ubiquinone), 30 kDa subunit n=2 Tax=mine drainage metagenome RepID=T1AWF6_9ZZZZ rbh
NADH dehydrogenase (Ubiquinone), 30 kDa subunit {ECO:0000313|EMBL:EQD60683.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative NADH-ubiquinone oxidoreductase
SCNpilot_cont_500_bf_scaffold_1520_8
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6059..6847
DNA (789bp) protein (263aa)
NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR1_9BURK
NADH ubiquinone oxidoreductase, 20 kDa subunit {ECO:0000313|EMBL:EGD06341.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
NADH ubiquinone oxidoreductase, 20 kDa subunit
SCNpilot_cont_500_bf_scaffold_1520_9
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6840..8816
DNA (1977bp) protein (659aa)
Putative NADH dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4H7_ACIMA
putative NADH dehydrogenase
Putative NADH dehydrogenase {ECO:0000313|EMBL:BAJ80029.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_1520_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8901..9275
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=3 Tax=Acidiphilium RepID=A5FV99_ACICJ
CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_cont_500_bf_scaffold_1520_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9286..9630
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003656D66
Uncharacterized protein {ECO:0000313|EMBL:KDM67693.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein; K09137 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1520_12
unknown

Not on your lists

9746..10312
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1520_13
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

10574..12709
DNA (2136bp) protein (712aa)
Enolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFB7_9SPHN
Tax=RBG_16_Spirochaetes_49_21_curated
SCNpilot_cont_500_bf_scaffold_1520_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13014..14315
DNA (1302bp) protein (434aa)
cfa; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ACI98979.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ACI98979.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN82_RHOCS
SCNpilot_cont_500_bf_scaffold_1520_15
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

14352..15560
DNA (1209bp) protein (403aa)
Arabinose efflux permease n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESQ5_9BACT
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:CCW33985.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_500_bf_scaffold_1520_16
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

15942..17576
DNA (1635bp) protein (545aa)
DNA mismatch repair protein MutS domain protein n=2 Tax=Chloroflexus RepID=A9WD21_CHLAA rbh
DNA mismatch repair protein MutS domain-containing protein rbh
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:ABY33590.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_500_bf_scaffold_1520_17
bacterium UASB270, Bacteria

Not on your lists

17573..19120
DNA (1548bp) protein (516aa)
Mismatch repair ATPase (MutS family) n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8DII1_THETY
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:GAK60226.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
DNA mismatch repair protein MutS domain-containing protein
SCNpilot_cont_500_bf_scaffold_1520_18
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19305..19967
DNA (663bp) protein (221aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
rppH; RNA pyrophosphohydrolase (EC:3.6.1.-); K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLT7_RHOPH
SCNpilot_cont_500_bf_scaffold_1520_19
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19891..20211)
DNA (321bp) protein (107aa)
Anti-sigma-factor antagonist n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G4I2_9BRAD
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000313|EMBL:KJC39549.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Displaying 19 items

View Taxonomy