ggKbase home page

SCNpilot_cont_500_bf_scaffold_3495

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3495_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..601)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61510.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(611..1480)
DNA (870bp) protein (290aa)
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ABE61511.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ABE61511.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Farnesyl-diphosphate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI6_NITHX
SCNpilot_cont_500_bf_scaffold_3495_3
unknown

Not on your lists

1650..1757
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3495_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1878..2396
DNA (519bp) protein (173aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000255|HAMAP-Rule:MF_00766}; Short=Monofunctional TGase {ECO:0000255|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_00766};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MTGA_NITHX
SCNpilot_cont_500_bf_scaffold_3495_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2543..2728
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RL32_NITWN
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_3495_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2865..3530
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61514.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3649..3957)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61515.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4131..5930
DNA (1800bp) protein (600aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI1_NITHX rbh
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABE61516.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5972..7030)
DNA (1059bp) protein (353aa)
Polysaccharide deacetylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH9_NITHX rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE61518.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7305..8696
DNA (1392bp) protein (464aa)
OmpA/MotB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH8_NITHX rbh
OmpA/MotB rbh
OmpA/MotB {ECO:0000313|EMBL:ABE61519.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8701..9015
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61520.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9268..10323
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH6_NITHX rbh
hypothetical protein; K07027 rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61521.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10361..11647
DNA (1287bp) protein (429aa)
histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH5_NITHX rbh
SCNpilot_cont_500_bf_scaffold_3495_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11780..12007
DNA (228bp) protein (76aa)
Phosphate-binding protein PstS n=2 Tax=Oligotropha carboxidovorans RepID=B6JD59_OLICO
pstS; phosphate-binding protein PstS; K02040 phosphate transport system substrate-binding protein
Phosphate-binding protein PstS {ECO:0000313|EMBL:AEI07976.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_3495_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11989..13779
DNA (1791bp) protein (597aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH3_NITHX rbh
phosphate ABC transporter permease; K02037 phosphate transport system permease protein rbh
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:ABE61524.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3495_16
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13856..14701
DNA (846bp) protein (282aa)
Phosphate transport system permease protein 2 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRG9_9BRAD
phosphate ABC transporter permease; K02038 phosphate transport system permease protein
Phosphate transport system permease protein 2 {ECO:0000313|EMBL:EAQ37424.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_3495_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14698..15522
DNA (825bp) protein (275aa)
pstB; phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate import ATP-binding protein PstB {ECO:0000255|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000255|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000255|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000255|HAMAP-Rule:MF_01702}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphate import ATP-binding protein PstB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PSTB_NITHX rbh
SCNpilot_cont_500_bf_scaffold_3495_18
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15554..16072
DNA (519bp) protein (173aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRG7_9BRAD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
Displaying 18 items

View Taxonomy