ggKbase home page

SCNpilot_cont_500_bf_scaffold_6880

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6880_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1154
DNA (1152bp) protein (384aa)
phosphoglucomutase/phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphoglucomutase/phosphomannomutase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1E2_9BRAD
Phosphoglucomutase/phosphomannomutase {ECO:0000313|EMBL:EAQ33946.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_6880_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1239..1748)
DNA (510bp) protein (170aa)
Transcriptional regulator, AsnC family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQZ8_NITHX rbh
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator rbh
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABE61349.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_6880_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1831..2679)
DNA (849bp) protein (283aa)
PfkB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQZ7_NITHX
PfkB protein
PfkB {ECO:0000313|EMBL:ABE61350.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_6880_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2723..3139)
DNA (417bp) protein (139aa)
Histidine triad (HIT) protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVQ4_NITWN
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABA03637.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_6880_5
unknown

Not on your lists

comp(3441..3833)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6880_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3847..5190
DNA (1344bp) protein (448aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ABE61352.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABE61352.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA polymerase III, subunits gamma and tau n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQZ5_NITHX
SCNpilot_cont_500_bf_scaffold_6880_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5206..5526
DNA (321bp) protein (107aa)
Nucleoid-associated protein NB311A_02757 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1E9_9BRAD
Nucleoid-associated protein NB311A_02757 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein; K09747 hypothetical protein
SCNpilot_cont_500_bf_scaffold_6880_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5673..6275
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RECR_NITWN rbh
recR; recombination protein RecR; K06187 recombination protein RecR rbh
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_6880_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6422..6832)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQZ2_NITHX
hypothetical protein; K09705 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61355.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_6880_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6877..7644)
DNA (768bp) protein (256aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR05_9BRAD
SCNpilot_cont_500_bf_scaffold_6880_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7784..8524
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQZ0_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61357.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_6880_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8573..9292)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQY9_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61358.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_6880_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9691..10626)
DNA (936bp) protein (312aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;"
Release factor glutamine methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQY8_NITHX rbh
SCNpilot_cont_500_bf_scaffold_6880_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10730..11815)
DNA (1086bp) protein (362aa)
Peptide chain release factor 1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RF1_NITHX
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_6880_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11861..13591)
DNA (1731bp) protein (577aa)
phosphoenolpyruvate-protein phosphotransferase PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
PTSINtr with GAF domain, PtsP n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQY6_NITHX
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ABE61361.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 15 items

View Taxonomy