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SCNpilot_cont_500_bf_scaffold_998_19

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(17503..18636)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide synthesis protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1ML41_RHIL3 similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 365.0
  • Bit_score: 462
  • Evalue 3.40e-127
  • rbh
lipopolysaccharide synthesis protein similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 365.0
  • Bit_score: 462
  • Evalue 1.10e-127
  • rbh
Putative lipopolysaccharide synthesis protein {ECO:0000313|EMBL:CAK06313.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 365.0
  • Bit_score: 462
  • Evalue 4.80e-127

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGCATCACTTCGCCTCGCCCTATCAGGTCTGTTCGTTCTGCGTGATGGATAACAGCAATCCCGGCGTTACGTTCAATGATCAGGGCCAGTGTATTTGCTGTCGCGAGGCGCTTGCTAGAATGCCTCATGAATGGTGGCCTACACCCGAAGGCCGCAGCAGGCTCGCAGGCATGGTCGCGCGGATCAGGCGTGAGATGGCCGACAAGCCCTACGATGTTATGGTTGGTCTGAGCGGTGGCGTTGACAGTGCCTATCTCGCGCACTTGCTGCGGCGTGACTTCAACCTGCGAATTCTGGCGGTTCATGTCGATGGTGGCTGGAATACCGAAGCAGCGGTGCGCAATATCGAATTGCTGGTCCGCAAGCTCGAAATTGATCTGCACACCTATGTTGTGGAGTGGCAGGAGATGCGCGATTTGCAACTCGCCTATCTCAAGGCCGCGGTATTAAATCAGGATGTACCGCAGGACCACGCTTTTTTCTCGACTCTGTATCGCCTGTCCAAGAGATTCGGTCAGAGATACTTCCTGAGTGGGGTCAATTTCAGCGGAGAGAGCGTCCACATTCCGGAAGCCGGATATCCAGCCATGGATGCGCGCAACCTTCTTGCCATCCATCGTGCTCATGGATTATCGCCGCTCCATTCCTTTCCGGTGCTCGGCTCGCTAAATTATCTGTGGCTTGCACGAATTCGCAAGCAAATTCGGATAATGCAACCGCTCGACTACCTGCCTTACGATAAGGAAGCCGCGAAGCGGGAGCTGATCGAAACCTATGGTTTCGTTGACTACGGCAGCAAACATCAAGAAAGCCGATTCACCAAGTTCTACCAGGAAATCTATCTGCCCGCGCGCTATCACTTTGATAAGCGTCGGCTCCACTATTCGGCGCTGATTGTTTCCGGACAGATGATGCGAGAGGAAGCCCTGCAACAGCTCAATGTCCCGATGACGTCAAAAGAGCAGGCGACGCGCGACTGCCGCTTCATAGCGAAAAAGCTCGGTATCACGGTTGAGGAGTTGAATCGACTGATTGCGCTAGAGCCAGTTCCGCACGAACACTATGCTAATAATCAGTGGCTCTATCAGCTTAATCGCCGATTGCGCGGAGTCGCGCCGAGGAAGGCGCAATGA
PROTEIN sequence
Length: 378
MHHFASPYQVCSFCVMDNSNPGVTFNDQGQCICCREALARMPHEWWPTPEGRSRLAGMVARIRREMADKPYDVMVGLSGGVDSAYLAHLLRRDFNLRILAVHVDGGWNTEAAVRNIELLVRKLEIDLHTYVVEWQEMRDLQLAYLKAAVLNQDVPQDHAFFSTLYRLSKRFGQRYFLSGVNFSGESVHIPEAGYPAMDARNLLAIHRAHGLSPLHSFPVLGSLNYLWLARIRKQIRIMQPLDYLPYDKEAAKRELIETYGFVDYGSKHQESRFTKFYQEIYLPARYHFDKRRLHYSALIVSGQMMREEALQQLNVPMTSKEQATRDCRFIAKKLGITVEELNRLIALEPVPHEHYANNQWLYQLNRRLRGVAPRKAQ*