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SCNpilot_cont_500_bf_scaffold_998

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_998_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..341
DNA (339bp) protein (113aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ABE63534.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ABE63534.1};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
UDP-glucose 6-dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJR3_NITHX
SCNpilot_cont_500_bf_scaffold_998_2
unknown

Not on your lists

379..519
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_998_3
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

607..1164
DNA (558bp) protein (186aa)
nadR; nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1); K13522 bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000382758D
Uncharacterized protein {ECO:0000313|EMBL:ESQ80762.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
SCNpilot_cont_500_bf_scaffold_998_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1358..3400)
DNA (2043bp) protein (681aa)
Bll5925 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HR5_BRADU
capsular polysaccharide biosynthesis protein; K13013 O-antigen biosynthesis protein WbqV
Bll5925 protein {ECO:0000313|EMBL:BAC51190.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_500_bf_scaffold_998_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3812..4009)
DNA (198bp) protein (66aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MLF3_9SPHN
Mobile element protein {ECO:0000313|EMBL:CCW17781.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_998_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4590..5591
DNA (1002bp) protein (334aa)
Glycosyl transferase, family 4 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJM4_NITHX rbh
glycosyl transferase family protein rbh
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ABE63573.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_998_7
unknown

Not on your lists

comp(5627..5899)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_998_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5899..6843)
DNA (945bp) protein (315aa)
fcl; GDP-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] rbh
GDP-L-fucose synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6U6_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig111, whole genome shotgun sequence {ECO:0000313|EMBL:KIU54297.1}; Flags: Fragment;; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_998_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6824..7909)
DNA (1086bp) protein (362aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037E2FBF rbh
SCNpilot_cont_500_bf_scaffold_998_10
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8037..9257
DNA (1221bp) protein (407aa)
Glycosyl transferase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G3Z7_9BRAD rbh
glycosyl transferase family protein rbh
Glycosyl transferase {ECO:0000313|EMBL:BAL75484.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_500_bf_scaffold_998_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9254..10201
DNA (948bp) protein (316aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
Bll5923 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HR7_BRADU
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJC34317.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCNpilot_cont_500_bf_scaffold_998_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10302..11489)
DNA (1188bp) protein (396aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRS7_9BRAD rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:ERF85504.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
glycosyl transferase family protein rbh
SCNpilot_cont_500_bf_scaffold_998_13
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11486..12415)
DNA (930bp) protein (310aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
GalE protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HI4_BRADU rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJC36627.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_500_bf_scaffold_998_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12412..13269)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM31_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig157, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52573.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ubiquinone/menaquinone biosynthesis methylase-like protein rbh
SCNpilot_cont_500_bf_scaffold_998_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13259..13828)
DNA (570bp) protein (190aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1INL1_9BRAD rbh
Acetyltransferase {ECO:0000313|EMBL:KJC56297.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_998_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13825..14664)
DNA (840bp) protein (280aa)
Biopolymer transporter TolQ n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRS3_9BRAD rbh
Biopolymer transporter TolQ {ECO:0000313|EMBL:ERF85499.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_998_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14717..15805)
DNA (1089bp) protein (363aa)
Bll6009 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HI2_BRADU rbh
hypothetical protein rbh
Bradyrhizobium elkanii strain UASWS1015 Contig157, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52571.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_998_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16145..17506)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T8L2_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig157, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52576.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
transmembrane protein
SCNpilot_cont_500_bf_scaffold_998_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17503..18636)
DNA (1134bp) protein (378aa)
Putative lipopolysaccharide synthesis protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1ML41_RHIL3 rbh
lipopolysaccharide synthesis protein rbh
Putative lipopolysaccharide synthesis protein {ECO:0000313|EMBL:CAK06313.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_998_20
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18636..19403)
DNA (768bp) protein (256aa)
imidazole glycerol phosphate synthase,subunit (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-]
Imidazoleglycerol-phosphate synthase n=1 Tax=Rhizobium sp. CF142 RepID=J1SS45_9RHIZ
Imidazole glycerol phosphate synthase {ECO:0000313|EMBL:KEQ02449.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
SCNpilot_cont_500_bf_scaffold_998_21
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19403..20017)
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Rhizobium sp. CF142 RepID=J2L4V8_9RHIZ
SCNpilot_cont_500_bf_scaffold_998_22
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20014..21435)
DNA (1422bp) protein (474aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9Y5_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KEQ02464.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
putative polysaccharide biosynthesis protein
SCNpilot_cont_500_bf_scaffold_998_23
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21452..22552)
DNA (1101bp) protein (367aa)
Butyryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRW5_9BRAD rbh
Erythromycin biosynthesis sensory transduction protein eryC1 {ECO:0000313|EMBL:KJC36606.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
DegT family aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_998_24
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22580..23050)
DNA (471bp) protein (157aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374ADEB
Bradyrhizobium elkanii strain UASWS1015 Contig151, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53070.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative hexapeptide repeat acetyltransferase
SCNpilot_cont_500_bf_scaffold_998_25
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23047..24108)
DNA (1062bp) protein (354aa)
Type IV secretion system protein VirB10 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6S8_9BRAD rbh
Type IV secretion system protein VirB10 {ECO:0000313|EMBL:ERF85537.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_998_26
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24608..25717
DNA (1110bp) protein (370aa)
acyltransferase 3 n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017465B2
Uncharacterized protein {ECO:0000313|EMBL:KJC36602.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
acyltransferase 3
SCNpilot_cont_500_bf_scaffold_998_27
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25812..26006)
DNA (195bp) protein (65aa)
Putative transposase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXD7_9BRAD
Putative transposase {ECO:0000313|EMBL:EAQ35348.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_998_28
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25993..27321)
DNA (1329bp) protein (443aa)
O-antigen polymerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUG6_9BRAD rbh
O-antigen polymerase {ECO:0000313|EMBL:EAQ36373.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
O-antigen polymerase rbh
SCNpilot_cont_500_bf_scaffold_998_29
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28284..29036)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57873.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Kelch motif protein
SCNpilot_cont_500_bf_scaffold_998_30
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29888..30091
DNA (204bp) protein (68aa)
O-antigen polymerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUG6_9BRAD
O-antigen polymerase {ECO:0000313|EMBL:EAQ36373.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
O-antigen polymerase
Displaying items 1-30 of 60 in total

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