ggKbase home page

SCNpilot_cont_500_bf_scaffold_998_25

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(23047..24108)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB10 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6S8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 353.0
  • Bit_score: 591
  • Evalue 7.80e-166
  • rbh
Type IV secretion system protein VirB10 {ECO:0000313|EMBL:ERF85537.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 353.0
  • Bit_score: 591
  • Evalue 1.10e-165
putative oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 353.0
  • Bit_score: 577
  • Evalue 2.80e-162
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGATCAAATTTGGTCTGCTAGGATGCGGTCGCATCGCCAAGCGTCATTCAGATCTGCTTGGAGGGGGACACATCAATGGCGCCAAGCTTGTCGGTGTTTGCGACGTGATCCACGAGAGGGCTGACGTAGTTGCAGCGCGATGGGGGGTTCCGGCATTCCACAACCTCGATGAGTTTCTGAGCCAGACGGATATTGACGTCATTTCGGTACTGACGCCGAGCGGGCTGCATGCTGCCCATGCGATCGCCATTGCAAAGGCAGGCAAGCACGTCGTCGTCGAGAAACCCATGGCATTGCGATTAGAGGATGCTGATGCGATGATTGAGGCGTGTGATGCCGCCGGCGTCAAGCTGTTCGTTGTCAAGCAAAACCGATTCAATGTTCCTGTGATGAAGGCGCGCGAAGCCCTCGACGCGGGACGGTTCGGTCGACTAATTTTAGGGACTGTCCGCGTACGGTGGTGCCGCGAACAGTCTTACTACGATCAGGATACGTGGCGCGGTACCTGGGCCTATGATGGCGGCGTGCTTGCAAACCAGGCTAGTCATCATGTCGATATGCTTGAGTGGTTTTTCGGTGATGTCGTCAGTGTTCATGCCCGTGGGACCACCGCGCTAGCCAACATCGAAGCCGAAGATACTGCGGTTGCGACGCTGAGGTTTCGAAATGGCGCGCTCGGAATTATCGAGGCGACGACGGCGGTGCGACCGAAGGATCTAGAAGGATCGCTGTCAATCATTGCAGAAAAGGGTGCTGTGGAAATTGGTGGATTCGCGGTTAACCAGATCAAGCATTGGCGATTCGTTGATGAGGAAGCCTCAGACCAGGAAGTGTTCCAAAAGTTTTCCGTCAACCCGCCGAATGTTTACGGATACGGACACCAAGCCTACTATGAGCATGTCGTGGACTGTTTGCGTAACCAAGGCCCTGCGTTGGTCGATGGCCTTGAGGGACGCAAGAGTTTGGAATTGATATCGGCCCTCTACGAGTCAATCGAAACTGGTAAGGAAGTTCAGCTCTATTTCAGTCCCCGCCTTTGCCGTCTCGGTATGTTGTCATGA
PROTEIN sequence
Length: 354
MIKFGLLGCGRIAKRHSDLLGGGHINGAKLVGVCDVIHERADVVAARWGVPAFHNLDEFLSQTDIDVISVLTPSGLHAAHAIAIAKAGKHVVVEKPMALRLEDADAMIEACDAAGVKLFVVKQNRFNVPVMKAREALDAGRFGRLILGTVRVRWCREQSYYDQDTWRGTWAYDGGVLANQASHHVDMLEWFFGDVVSVHARGTTALANIEAEDTAVATLRFRNGALGIIEATTAVRPKDLEGSLSIIAEKGAVEIGGFAVNQIKHWRFVDEEASDQEVFQKFSVNPPNVYGYGHQAYYEHVVDCLRNQGPALVDGLEGRKSLELISALYESIETGKEVQLYFSPRLCRLGMLS*