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SCNpilot_cont_500_bf_scaffold_4696

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4696_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1379
DNA (1377bp) protein (459aa)
Peptide chain release factor 3 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTA4_9GAMM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
bacterial peptide chain release factor 3 (bRF-3)
SCNpilot_cont_500_bf_scaffold_4696_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1464..2375
DNA (912bp) protein (304aa)
Abortive infection protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLI7_9GAMM rbh
Abortive infection protein {ECO:0000313|EMBL:EIL88078.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative metal-dependent membrane protease
SCNpilot_cont_500_bf_scaffold_4696_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2418..2810)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01482.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4696_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2815..5286)
DNA (2472bp) protein (824aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL98342.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIL98342.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFV1_9GAMM rbh
acyl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_4696_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5306..6223)
DNA (918bp) protein (306aa)
Alpha/beta hydrolase fold domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFV0_9GAMM rbh
Alpha/beta hydrolase fold domain-containing protein {ECO:0000313|EMBL:EIL98341.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
SCNpilot_cont_500_bf_scaffold_4696_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6322..6900
DNA (579bp) protein (193aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X2_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL96263.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_4696_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8064..8732
DNA (669bp) protein (223aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X1_9GAMM
phosphoenolpyruvate carboxykinase (GTP)
SCNpilot_cont_500_bf_scaffold_4696_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8845..9393
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X0_9GAMM
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL96261.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_cont_500_bf_scaffold_4696_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9390..9833
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE49_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87778.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_4696_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9852..10367
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98829.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
Displaying 10 items

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