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SCNpilot_cont_500_bf_scaffold_2422

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2422_1
unknown

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comp(2..835)
DNA (834bp) protein (278aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2422_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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989..1300
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=B3G2L1_PSEAI
Putative uncharacterized protein {ECO:0000313|EMBL:ACD39273.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2422_3
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1540..3075
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00037517A9
Transposase {ECO:0000313|EMBL:KJZ08354.1}; TaxID=43658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra.;"
Integrase catalytic region protein
SCNpilot_cont_500_bf_scaffold_2422_4
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3065..3811
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036ABE93 rbh
transposase-related ATP-binding subunit
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
SCNpilot_cont_500_bf_scaffold_2422_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3934..4413)
DNA (480bp) protein (160aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutaredoxin-dependent arsenate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDQ0_9GAMM
glutaredoxin-dependent arsenate reductase
SCNpilot_cont_500_bf_scaffold_2422_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4410..5225)
DNA (816bp) protein (272aa)
Arsenical resistance protein ArsH n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP05_9GAMM rbh
Arsenical resistance protein ArsH {ECO:0000313|EMBL:EIM01197.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
arsenical resistance protein ArsH rbh
SCNpilot_cont_500_bf_scaffold_2422_7
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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5278..5595
DNA (318bp) protein (106aa)
Transcriptional regulator, ArsR family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QXG9_CHRSD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE58839.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCNpilot_cont_500_bf_scaffold_2422_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5622..6140
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN0_9GAMM
protein-tyrosine-phosphatase
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AGG88862.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2422_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6137..7210
DNA (1074bp) protein (358aa)
Arsenical-resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLL0_9GAMM rbh
arsenical-resistance protein rbh
Arsenical-resistance protein {ECO:0000313|EMBL:AGG88558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_2422_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7303..7656
DNA (354bp) protein (118aa)
Transcription regulator protein, arsenical resistance operon repressor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSY4_9GAMM
Transcription regulator protein, arsenical resistance operon repressor {ECO:0000313|EMBL:EIL90325.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2422_11
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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7969..8238
DNA (270bp) protein (90aa)
Putative Thioredoxin/glutaredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA4_THIA3
putative Thioredoxin/glutaredoxin
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_cont_500_bf_scaffold_2422_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8291..8698
DNA (408bp) protein (136aa)
Putative MerR family regulatory protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA3_THIA3
putative MerR family regulatory protein
Putative MerR family regulatory protein {ECO:0000313|EMBL:CAZ89681.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCNpilot_cont_500_bf_scaffold_2422_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8710..8970
DNA (261bp) protein (87aa)
Thioredoxin/glutaredoxin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ3_NITHX
thioredoxin/glutaredoxin
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:ABE65004.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2422_14
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8973..9674
DNA (702bp) protein (234aa)
Cytochrome c biogenesis protein, transmembrane region n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB7_OLICO
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_500_bf_scaffold_2422_15
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9730..10962
DNA (1233bp) protein (411aa)
Major facilitator transporter n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EDN3_9BURK rbh
Major facilitator transporter {ECO:0000313|EMBL:EKZ97450.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_2422_16
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11102..11644
DNA (543bp) protein (181aa)
Putative arsenate reductase arsC-like protein {ECO:0000313|EMBL:CCD99731.1}; EC=1.20.4.1 {ECO:0000313|EMBL:CCD99731.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
arsenate reductase subunit ArsC-like protein (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
Putative arsenate reductase arsC-like protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZV4_9BRAD
SCNpilot_cont_500_bf_scaffold_2422_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11650..11982)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003693D81
DNA-binding protein {ECO:0000313|EMBL:AIF48160.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative transcriptional repressor protein
SCNpilot_cont_500_bf_scaffold_2422_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12119..12913
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F670E
Uncharacterized protein {ECO:0000313|EMBL:AIF48161.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_500_bf_scaffold_2422_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12962..13258
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPQ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89198.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_2422_20
unknown

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13317..13634
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 20 items

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