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SCNpilot_cont_500_bf_scaffold_15927

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_15927_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..886)
DNA (885bp) protein (295aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=I4WGB6_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_15927_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2656..3027)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8T5_9GAMM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
LSU ribosomal protein L12P
SCNpilot_cont_500_bf_scaffold_15927_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3074..3598)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8T3_9GAMM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ribosomal protein L10
SCNpilot_cont_500_bf_scaffold_15927_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3939..4568)
DNA (630bp) protein (210aa)
50S ribosomal protein L1 n=1 Tax=Dyella ginsengisoli RepID=UPI00034BD5CC
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ribosomal protein L1
SCNpilot_cont_500_bf_scaffold_15927_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4572..5000)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Dyella japonica RepID=UPI00030415B6
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
LSU ribosomal protein L11P
SCNpilot_cont_500_bf_scaffold_15927_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5371..5856)
DNA (486bp) protein (162aa)
Transcription termination/antitermination protein NusG n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8S9_9GAMM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcription antitermination protein nusG
SCNpilot_cont_500_bf_scaffold_15927_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5867..6256)
DNA (390bp) protein (130aa)
Protein translocase subunit SecE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VIS8_9GAMM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
preprotein translocase, SecE subunit
SCNpilot_cont_500_bf_scaffold_15927_trna_1
unknown

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comp(6341..6413)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_15927_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6516..6695)
DNA (180bp) protein (60aa)
Elongation factor Tu n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYI4_FRAAD
translation elongation factor TU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Displaying 9 items

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