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SCNpilot_cont_500_bf_scaffold_582

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_582_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134..826)
DNA (693bp) protein (231aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N9_9GAMM
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component {ECO:0000313|EMBL:EIL95830.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
SCNpilot_cont_500_bf_scaffold_582_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

843..1442
DNA (600bp) protein (200aa)
Acyl-CoA thioesterase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N8_9GAMM rbh
Acyl-CoA thioesterase {ECO:0000313|EMBL:EIL95829.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
lysophospholipase L1-like esterase
SCNpilot_cont_500_bf_scaffold_582_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1523..2254
DNA (732bp) protein (244aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR7_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88044.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_582_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2268..3254
DNA (987bp) protein (329aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZH2_9GAMM
Signal transduction histidine kinase {ECO:0000313|EMBL:EIL92613.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_582_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3297..4655)
DNA (1359bp) protein (453aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Acetate CoA-transferase YdiF n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N5_9GAMM rbh
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit rbh
SCNpilot_cont_500_bf_scaffold_582_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4821..5186
DNA (366bp) protein (122aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N4_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_582_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5179..6513
DNA (1335bp) protein (445aa)
TonB family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV43_9GAMM
antirepressor regulating drug resistance protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_582_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6632..7648
DNA (1017bp) protein (339aa)
Peptidase T2 asparaginase 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ06_9GAMM rbh
asparaginase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_582_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7709..8173)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ05_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88050.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_582_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8173..9342)
DNA (1170bp) protein (390aa)
Signal peptide protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M9_9GAMM rbh
Signal peptide protein {ECO:0000313|EMBL:EIL95820.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_582_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9364..11628)
DNA (2265bp) protein (755aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M8_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL95819.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane receptor protein rbh
SCNpilot_cont_500_bf_scaffold_582_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11812..12399)
DNA (588bp) protein (196aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M7_9GAMM rbh
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein {ECO:0000313|EMBL:EIL95818.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein rbh
SCNpilot_cont_500_bf_scaffold_582_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12479..13783)
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZG6_9GAMM rbh
signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_582_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..15353)
DNA (1548bp) protein (516aa)
amino acid transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034963C7 rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:EIL91077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid/peptide transporter (peptide:H symporter) rbh
SCNpilot_cont_500_bf_scaffold_582_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15575..15943
DNA (369bp) protein (123aa)
diacylglycerol kinase (EC:2.7.1.107)
DeoR family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003468E08
Diacylglycerol kinase {ECO:0000313|EMBL:EIL92605.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_582_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16005..16625
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ8_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_582_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16627..17511
DNA (885bp) protein (295aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M2_9GAMM rbh
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:EIL95813.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
beta-propeller domain-containing protein, methanol dehydrogenase
SCNpilot_cont_500_bf_scaffold_582_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17513..18016
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ6_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88059.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_582_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18278..21394)
DNA (3117bp) protein (1039aa)
Putative TonB dependent receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU6_9GAMM rbh
Putative TonB dependent receptor protein {ECO:0000313|EMBL:EIL99737.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative TonB dependent receptor protein rbh
SCNpilot_cont_500_bf_scaffold_582_20
unknown

Not on your lists

comp(21811..21975)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_582_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..25274)
DNA (3096bp) protein (1032aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK2_9GAMM rbh
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL98243.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor for ferrienterochelin and colicins
SCNpilot_cont_500_bf_scaffold_582_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26226..27014)
DNA (789bp) protein (263aa)
Sel1 domain-containing protein repeat-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV31_9GAMM
Sel1 domain-containing protein repeat-containing protein {ECO:0000313|EMBL:EIL91072.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Sel1 domain-containing protein repeat-containing protein
SCNpilot_cont_500_bf_scaffold_582_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27086..29947)
DNA (2862bp) protein (954aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D8D6
Uncharacterized protein {ECO:0000313|EMBL:EIL91071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins rbh
SCNpilot_cont_500_bf_scaffold_582_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30508..32466)
DNA (1959bp) protein (653aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ3_9GAMM rbh
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL92600.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase rbh
SCNpilot_cont_500_bf_scaffold_582_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32615..33517
DNA (903bp) protein (301aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7R0_9GAMM
prolipoprotein diacylglyceryl transferase
SCNpilot_cont_500_bf_scaffold_582_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33514..34308
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thymidylate synthase (EC:2.1.1.45) rbh
Thymidylate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Q8_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_582_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34656..35144
DNA (489bp) protein (163aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Q6_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_582_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35147..36100
DNA (954bp) protein (318aa)
thiamine monophosphate synthase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] rbh
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Q5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95496.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_582_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36102..36638)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00170.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_582_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36635..36871)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WP79_9GAMM
Protein of unknown function (DUF1653)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 171 in total

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