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SCNpilot_cont_500_bf_scaffold_600

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_600_1
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

461..853
DNA (393bp) protein (131aa)
glyoxalase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B57E15
Uncharacterized protein {ECO:0000313|EMBL:KFN43030.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_600_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1063..3051
DNA (1989bp) protein (663aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FACA15 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46006.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
adenylate cyclase
SCNpilot_cont_500_bf_scaffold_600_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3109..3693)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020R0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84584.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_500_bf_scaffold_600_4
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3898..4266
DNA (369bp) protein (123aa)
Glyoxalase bleomycin resistance protein dioxygenase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W324_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KEF42408.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_600_5
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4343..6220)
DNA (1878bp) protein (626aa)
Dihydroxy-acid dehydratase {ECO:0000255|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000255|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000255|HAMAP-Rule:MF_00012};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=ILVD_GRABC
SCNpilot_cont_500_bf_scaffold_600_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6261..7829)
DNA (1569bp) protein (523aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
L-threonine ammonia-lyase (EC:4.3.1.19) rbh
Threonine dehydratase, biosynthetic n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9D0_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_600_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..8107)
DNA (282bp) protein (94aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C9_9GAMM
Acetolactate synthase small subunit {ECO:0000313|EMBL:EIL96070.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_600_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..10138)
DNA (1869bp) protein (623aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetolactate synthase, large subunit (EC:2.2.1.6) rbh
Acetolactate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C8_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_600_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10303..10644)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_600_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10713..11732)
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ketol-acid reductoisomerase (EC:1.1.1.86) rbh
ketol-acid reductoisomerase n=1 Tax=Dyella japonica RepID=UPI0002D73596 rbh
SCNpilot_cont_500_bf_scaffold_600_11
unknown

Not on your lists

comp(11729..11962)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_600_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11953..13050)
DNA (1098bp) protein (366aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C6_9GAMM
3-isopropylmalate dehydrogenase
SCNpilot_cont_500_bf_scaffold_600_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13196..13780)
DNA (585bp) protein (195aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
isopropylmalate isomerase n=1 Tax=Dyella japonica RepID=UPI00030A4F18 rbh
3-isopropylmalate dehydratase, small subunit
SCNpilot_cont_500_bf_scaffold_600_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13986..15401)
DNA (1416bp) protein (472aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WK97_9GAMM rbh
3-isopropylmalate dehydratase, large subunit rbh
SCNpilot_cont_500_bf_scaffold_600_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15398..16372)
DNA (975bp) protein (325aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EIL96064.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EIL96064.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C3_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_600_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16388..17977)
DNA (1590bp) protein (530aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
2-isopropylmalate synthase (EC:2.3.3.13) rbh
2-isopropylmalate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C2_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_600_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18758..19822
DNA (1065bp) protein (355aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC42_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL97033.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_600_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19843..22890
DNA (3048bp) protein (1016aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381A0C1 rbh
TonB-dependent receptor
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_600_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23017..24546
DNA (1530bp) protein (510aa)
tryptophan halogenase; K14266 FADH2 O2-dependent halogenase I [EC:1.14.14.7]
tryptophan halogenase n=1 Tax=Dyella ginsengisoli RepID=UPI0003478D1B
Tryptophan halogenase {ECO:0000313|EMBL:EIL97031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_600_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24629..26128
DNA (1500bp) protein (500aa)
Tat pathway signal protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003493E52 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97030.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_600_21
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26138..27637
DNA (1500bp) protein (500aa)
xylan 1,4-beta-xylosidase; K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37] rbh
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:AEU38534.1}; EC=3.2.1.37 {ECO:0000313|EMBL:AEU38534.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D3267 rbh
SCNpilot_cont_500_bf_scaffold_600_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27733..29013
DNA (1281bp) protein (427aa)
Family 1 extracellular solute-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB7_9GAMM rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIL90848.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family rbh
SCNpilot_cont_500_bf_scaffold_600_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29010..29885
DNA (876bp) protein (292aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB6_9GAMM rbh
carbohydrate ABC transporter membrane protein 1, CUT1 family rbh
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGG90980.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_600_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29882..30703
DNA (822bp) protein (274aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NU85_9GAMM rbh
carbohydrate ABC transporter membrane protein 2, CUT1 family rbh
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AGG90981.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_600_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30700..32913
DNA (2214bp) protein (738aa)
Alpha-N-acetylglucosaminidase (EC:3.2.1.50) rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000374411B rbh
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:AIF46031.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_500_bf_scaffold_600_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32946..34097)
DNA (1152bp) protein (384aa)
Multiple sugar ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC4_9GAMM rbh
carbohydrate ABC transporter ATP-binding protein, CUT1 family rbh
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGG90972.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_600_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34196..35593
DNA (1398bp) protein (466aa)
Beta-glucosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG3_9GAMM
beta-galactosidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_600_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35590..37191
DNA (1602bp) protein (534aa)
Glycoside hydrolase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRR3_9GAMM
Glycoside hydrolase family protein {ECO:0000313|EMBL:EIM02155.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
beta-xylosidase
SCNpilot_cont_500_bf_scaffold_600_29
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37469..38092
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003626173
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHX13683.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
wza; polysaccharide export protein; K01991 polysaccharide export outer membrane protein
SCNpilot_cont_500_bf_scaffold_600_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38128..39672
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91317.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polysaccharide chain length determinant protein rbh
Displaying items 1-30 of 45 in total

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