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SCNpilot_cont_500_bf_scaffold_634

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_634_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..287
DNA (285bp) protein (95aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1V0_9GAMM
SCNpilot_cont_500_bf_scaffold_634_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..1072)
DNA (642bp) protein (214aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00231964};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIK3_9GAMM rbh
ubiquinone biosynthesis protein COQ7 rbh
SCNpilot_cont_500_bf_scaffold_634_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1209..1721
DNA (513bp) protein (171aa)
50S ribosomal protein L13 n=1 Tax=Dyella japonica RepID=UPI0002F8345D
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
LSU ribosomal protein L13P
SCNpilot_cont_500_bf_scaffold_634_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1731..2123
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN52_9GAMM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribosomal protein S9
SCNpilot_cont_500_bf_scaffold_634_trna_1
unknown

Not on your lists

2178..2248
DNA (71bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_634_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3225..3632)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89920.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_634_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3629..4120)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNA2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM00944.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_634_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4120..4452)
DNA (333bp) protein (111aa)
Putative mebrane transport protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS7_9GAMM
Putative mebrane transport protein {ECO:0000313|EMBL:EIL89918.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
small multidrug resistance protein; K03297 small multidrug resistance protein, SMR family
SCNpilot_cont_500_bf_scaffold_634_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4457..5353)
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW56_9GAMM
phosphoribosylaminoimidazole-succinocarboxamide synthase
SCNpilot_cont_500_bf_scaffold_634_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5481..5807
DNA (327bp) protein (109aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=M4NSM6_9GAMM
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGG90501.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_634_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5804..6610
DNA (807bp) protein (269aa)
Protein with DnaJ-like domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WW54_9GAMM
protein with DnaJ-like domain
Protein with DnaJ-like domain {ECO:0000313|EMBL:AGG90500.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_634_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6739..7407
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFY2_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_634_12
unknown

Not on your lists

comp(7903..8022)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_634_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8196..8885
DNA (690bp) protein (230aa)
Proteobacterial dedicated sortase system response regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN97_9GAMM rbh
Proteobacterial dedicated sortase system response regulator {ECO:0000313|EMBL:EIM00939.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
two component transcriptional regulator, winged helix family rbh
SCNpilot_cont_500_bf_scaffold_634_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8882..9478
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL93471.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_634_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9486..11498
DNA (2013bp) protein (671aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN95_9GAMM rbh
signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_634_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11560..13035
DNA (1476bp) protein (492aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EIL98379.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EIL98379.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter sp. 115 RepID=I4WFY8_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_634_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13173..13772
DNA (600bp) protein (200aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW20_9GAMM rbh
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase rbh
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase {ECO:0000313|EMBL:AGG90460.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_634_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13769..14824
DNA (1056bp) protein (352aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIJ8_9GAMM rbh
anthranilate phosphoribosyltransferase rbh
SCNpilot_cont_500_bf_scaffold_634_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14890..15684
DNA (795bp) protein (265aa)
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW18_9GAMM
SCNpilot_cont_500_bf_scaffold_634_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15684..16388
DNA (705bp) protein (235aa)
Phosphoserine phosphatase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIK0_9GAMM
Haloacid dehalogenase {ECO:0000313|EMBL:AHX15764.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_634_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16530..18173)
DNA (1644bp) protein (548aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIW0_9GAMM rbh
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:EIL87151.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
FAD-dependent dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_634_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18301..18816)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90609.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_634_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18813..20168)
DNA (1356bp) protein (452aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIW2_9GAMM rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL87153.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
arabinose efflux permease family protein
SCNpilot_cont_500_bf_scaffold_634_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20202..20531)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHU8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX15619.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_634_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20528..21133)
DNA (606bp) protein (202aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIW5_9GAMM rbh
GTP cyclohydrolase I rbh
SCNpilot_cont_500_bf_scaffold_634_26
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21343..21990
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL35636.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
SCNpilot_cont_500_bf_scaffold_634_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21987..22196
DNA (210bp) protein (70aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2W9_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL93810.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_634_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22207..23781)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAJ4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87489.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_634_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23906..25099
DNA (1194bp) protein (398aa)
NAD(P)H-nitrite reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAH2_9GAMM
NAD(P)H-nitrite reductase
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:AGG87490.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 136 in total

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