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SCNpilot_cont_500_bf_scaffold_666

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Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_666_1
unknown

Not on your lists

3..68
DNA (66bp) protein (22aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_666_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130..879)
DNA (750bp) protein (250aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP57_9GAMM rbh
Putative transmembrane protein {ECO:0000313|EMBL:EIL88998.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative permease rbh
SCNpilot_cont_500_bf_scaffold_666_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

999..2870
DNA (1872bp) protein (624aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) flavoprotein, alpha-component (EC:1.8.1.2) rbh
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP58_9GAMM
SCNpilot_cont_500_bf_scaffold_666_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2895..4583
DNA (1689bp) protein (563aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) hemoprotein, beta-component (EC:1.8.1.2) rbh
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP59_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_666_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4580..5302
DNA (723bp) protein (241aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00055482}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00089161};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xan
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP60_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_666_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5268..6311)
DNA (1044bp) protein (348aa)
Transcriptional regulator CysB-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNI0_9GAMM rbh
Transcriptional regulator CysB-like protein {ECO:0000313|EMBL:EIL88771.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_666_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6708..8177
DNA (1470bp) protein (490aa)
precorrin-2 dehydrogenase (EC:1.3.1.76 2.1.1.107)
Siroheme synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNI1_9GAMM rbh
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_500_bf_scaffold_666_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8245..9186
DNA (942bp) protein (314aa)
cysteine synthase (EC:2.5.1.47) rbh
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cysteine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVD3_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_666_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9244..9627)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9N7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96178.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_666_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9801..10421
DNA (621bp) protein (207aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9N8_9GAMM rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIL96179.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione S-transferase rbh
SCNpilot_cont_500_bf_scaffold_666_11

Not on your lists

comp(10412..11101)
DNA (690bp) protein (230aa)
Plasmid maintenance system antidote protein, XRE family (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C218_9ZZZZ
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:EQD60160.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
XRE family plasmid maintenance system antidote protein
SCNpilot_cont_500_bf_scaffold_666_12

Not on your lists

comp(11112..11390)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZHF0_9ZZZZ
Plasmid maintenance system killer protein {ECO:0000313|EMBL:EQD28164.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
higA; proteic killer suppression protein; K07334 proteic killer suppression protein
SCNpilot_cont_500_bf_scaffold_666_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11519..12886)
DNA (1368bp) protein (456aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Adenylosuccinate lyase (EC:4.3.2.2) rbh
Adenylosuccinate lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9N9_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_666_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13118..14551
DNA (1434bp) protein (478aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fumarase (EC:4.2.1.2) rbh
Fumarate hydratase class II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW88_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_666_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14461..14892)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96679.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_666_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14924..15646)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB39_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96680.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_666_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15727..16440)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVC7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG88654.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_666_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16472..17431)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WD28_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97369.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_666_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17428..18285)
DNA (858bp) protein (286aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB42_9GAMM rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL96683.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type multidrug transport system, ATPase component rbh
SCNpilot_cont_500_bf_scaffold_666_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18282..18656)
DNA (375bp) protein (125aa)
GntR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW82_9GAMM
putative transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EIL91473.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_666_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18660..19043)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WD25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97366.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_666_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19457..20434
DNA (978bp) protein (326aa)
Transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ6_9GAMM rbh
transcriptional regulator rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_666_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20524..21669
DNA (1146bp) protein (382aa)
Methionine aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB48_9GAMM rbh
Methionine aminotransferase {ECO:0000313|EMBL:EIL96689.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate/tyrosine/aromatic aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_666_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21666..22472
DNA (807bp) protein (269aa)
Putative amidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NG91_9GAMM rbh
putative amidohydrolase rbh
Putative amidohydrolase {ECO:0000313|EMBL:AGG88663.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_666_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22518..22856)
DNA (339bp) protein (113aa)
Glutaredoxin-dependent arsenate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND90_9GAMM
glutaredoxin-dependent arsenate reductase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_666_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22856..24280)
DNA (1425bp) protein (475aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
pseudouridine synthase family protein (EC:5.4.99.-) rbh
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW74_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_666_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24293..25114)
DNA (822bp) protein (274aa)
Segregation and condensation protein B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNK1_9GAMM rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
segregation and condensation protein B
SCNpilot_cont_500_bf_scaffold_666_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25132..26088)
DNA (957bp) protein (319aa)
Segregation and condensation protein A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNK2_9GAMM rbh
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_666_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26834..27199
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW71_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91462.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PilZ domain-containing protein
SCNpilot_cont_500_bf_scaffold_666_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27237..29003)
DNA (1767bp) protein (589aa)
Putative long-chain fatty acyl CoA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEW9_9GAMM rbh
Putative long-chain fatty acyl CoA ligase {ECO:0000313|EMBL:EIL98010.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II rbh
Displaying items 1-30 of 236 in total

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