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SCNpilot_cont_500_bf_scaffold_758

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_758_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1482
DNA (1482bp) protein (494aa)
fumarate hydratase; K01676 fumarate hydratase, class I [EC:4.2.1.2] rbh
Fumarate hydratase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC65_9GAMM rbh
Fumarate hydratase {ECO:0000313|EMBL:EIL97056.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_758_2
unknown

Not on your lists

comp(1356..2114)
DNA (759bp) protein (253aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_758_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2180..4801
DNA (2622bp) protein (874aa)
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein {ECO:0000313|EMBL:EIL97057.1}; EC=4.1.1.20 {ECO:0000313|EMBL:EIL97057.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aspartate kinase (EC:4.1.1.20 2.7.2.4) rbh
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC66_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_758_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4894..5274
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC67_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX12195.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_758_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5432..6844
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC67_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97058.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_758_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6844..8202
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC68_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_758_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8237..8737)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94424.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_758_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8881..10950)
DNA (2070bp) protein (690aa)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC77_9GAMM rbh
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL97068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative metalloendopeptidase rbh
SCNpilot_cont_500_bf_scaffold_758_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11057..14836)
DNA (3780bp) protein (1260aa)
Pathogenicity protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY5_9GAMM
Pathogenicity protein {ECO:0000313|EMBL:EIL91376.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_758_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15015..16793)
DNA (1779bp) protein (593aa)
Surface antigen (D15) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY4_9GAMM rbh
Surface antigen (D15) {ECO:0000313|EMBL:EIL91375.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
outer membrane protein rbh
SCNpilot_cont_500_bf_scaffold_758_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17087..17413)
DNA (327bp) protein (109aa)
nucleotide pyrophosphohydrolase n=1 Tax=Rudaea cellulosilytica RepID=UPI000363C3DE
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:KGM56296.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
MazG nucleotide pyrophosphohydrolase
SCNpilot_cont_500_bf_scaffold_758_12
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17446..17955)
DNA (510bp) protein (170aa)
Hit-like protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XRY6_DELAC
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_758_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18237..19088)
DNA (852bp) protein (284aa)
Nucleoside-diphosphate-sugar epimerase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKM1_9GAMM
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG90238.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_758_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19096..20802)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH60_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90239.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_758_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21062..23227)
DNA (2166bp) protein (722aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC86_9GAMM rbh
(p)ppGpp synthetase, RelA/SpoT family rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_758_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23314..23793
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM02350.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_758_17
unknown

Not on your lists

23801..24016
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_758_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24041..25684)
DNA (1644bp) protein (548aa)
Acetolactate synthase I/II/III large subunit {ECO:0000313|EMBL:CCP11497.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CCP11497.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
acetolactate synthase (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Acetolactate synthase I/II/III large subunit n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMI9_STEMA rbh
SCNpilot_cont_500_bf_scaffold_758_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25722..27128)
DNA (1407bp) protein (469aa)
aldehyde dehydrogenase; K08324 aldehyde dehydrogenase family protein [EC:1.2.1.-] rbh
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:CCP16393.1}; EC=1.2.1.- {ECO:0000313|EMBL:CCP16393.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
succinate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E942CF rbh
SCNpilot_cont_500_bf_scaffold_758_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27410..28207)
DNA (798bp) protein (266aa)
Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G773_STEMA rbh
putative DNA-binding protein rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCP11493.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
SCNpilot_cont_500_bf_scaffold_758_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28418..28933
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC85_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97076.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_758_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29010..31061)
DNA (2052bp) protein (684aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC84_9GAMM rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL97075.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ATP-dependent helicase HrpA
SCNpilot_cont_500_bf_scaffold_758_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31992..33692)
DNA (1701bp) protein (567aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JWK6_BURP1
Uncharacterized protein {ECO:0000313|EMBL:GAN45902.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_758_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33756..34223
DNA (468bp) protein (156aa)
ferritin n=1 Tax=Dyella ginsengisoli RepID=UPI000347B45B
Ferritin, Dps family protein {ECO:0000313|EMBL:EIL97073.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
SCNpilot_cont_500_bf_scaffold_758_25
unknown

Not on your lists

comp(34275..34688)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_758_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34798..37464)
DNA (2667bp) protein (889aa)
Peptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM13_9GAMM rbh
Insulinase {ECO:0000313|EMBL:EIL95719.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative Zn-dependent peptidase rbh
SCNpilot_cont_500_bf_scaffold_758_27
unknown

Not on your lists

comp(37532..37852)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_758_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38025..39521)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8D0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95721.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_758_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39556..40452)
DNA (897bp) protein (299aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8D2_9GAMM rbh
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL95723.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type multidrug transport system, ATPase component rbh
SCNpilot_cont_500_bf_scaffold_758_30
unknown

Not on your lists

comp(40518..40730)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 92 in total

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