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SCNpilot_cont_500_bf_scaffold_770

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_770_1
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2210
DNA (2208bp) protein (736aa)
TonB-dependent receptor n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CF35_XANCA rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGE51255.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. vasculorum.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_770_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2116..3369)
DNA (1254bp) protein (418aa)
acyl-CoA dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C9B07
Putative butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EIL88201.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_770_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3567..4496
DNA (930bp) protein (310aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Z9_9GAMM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIL94890.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_cont_500_bf_scaffold_770_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4507..5610
DNA (1104bp) protein (368aa)
Cobalamin-dependent methionine synthase I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM76_9GAMM
Cobalamin-dependent methionine synthase I {ECO:0000313|EMBL:EIM00568.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cobalamin-dependent methionine synthase I
SCNpilot_cont_500_bf_scaffold_770_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6765..8366
DNA (1602bp) protein (534aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM75_9GAMM
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIM00567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_770_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8371..8712)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036070FB
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KJV30300.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_770_trna_1
unknown

Not on your lists

8810..8881
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_770_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9262..10290
DNA (1029bp) protein (343aa)
leucine dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0002DD5B75
Leucine dehydrogenase {ECO:0000313|EMBL:AIF47545.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
glutamate dehydrogenase/leucine dehydrogenase
SCNpilot_cont_500_bf_scaffold_770_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10409..11020
DNA (612bp) protein (204aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHE8_9GAMM
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane lipoprotein carrier protein LolA
SCNpilot_cont_500_bf_scaffold_770_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..13401
DNA (2385bp) protein (795aa)
Putative lipoprotein transmembrane n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHE9_9GAMM rbh
Putative lipoprotein transmembrane {ECO:0000313|EMBL:EIL98890.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
lipoprotein transmembrane rbh
SCNpilot_cont_500_bf_scaffold_770_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13620..14162
DNA (543bp) protein (181aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C2FD4
Uncharacterized protein {ECO:0000313|EMBL:EIL98895.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_770_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14159..14518
DNA (360bp) protein (120aa)
Acyl-CoA synthetase, AMP-(Fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHF5_9GAMM
Acyl-CoA synthetase, AMP-(Fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase {ECO:0000313|EMBL:EIL98896.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AMP-binding protein
SCNpilot_cont_500_bf_scaffold_770_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..14982
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNT6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88877.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
3-hydroxylacyl-(acyl carrier protein) dehydratase
SCNpilot_cont_500_bf_scaffold_770_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15240..16397
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase (EC:1.3.8.4) rbh
isovaleryl-CoA dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI0003453A5C rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_770_14
unknown

Not on your lists

16476..16745
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_770_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16804..18666)
DNA (1863bp) protein (621aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Beta-galactosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB7_9GAMM rbh
beta-galactosidase rbh
SCNpilot_cont_500_bf_scaffold_770_16
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(18689..19903)
DNA (1215bp) protein (405aa)
Putative lipoprotein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UJW7_TANFA
putative lipoprotein
Tax=RBG_13_Acidobacteria_68_16_curated
SCNpilot_cont_500_bf_scaffold_770_17
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20019..21197
DNA (1179bp) protein (393aa)
Glycosyl hydrolase family 88 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1W3_GRAMM rbh
glycosyl hydrolase family protein rbh
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:AEU37015.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_500_bf_scaffold_770_18
unknown

Not on your lists

21194..21307
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_770_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21282..23144)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI0003693942 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH94512.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_770_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23386..25128)
DNA (1743bp) protein (581aa)
alpha-L-fucosidase; K01206 alpha-L-fucosidase [EC:3.2.1.51] rbh
Alpha-L-fucosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB6_9GAMM rbh
Alpha-L-fucosidase {ECO:0000313|EMBL:EIL97457.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_770_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25188..26648)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ94_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX14156.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_770_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26651..28714)
DNA (2064bp) protein (688aa)
Enterotoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y4_9GAMM rbh
Enterotoxin {ECO:0000313|EMBL:EIL94175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enterotoxin rbh
SCNpilot_cont_500_bf_scaffold_770_23
unknown

Not on your lists

comp(28952..29230)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003614A3F
SCNpilot_cont_500_bf_scaffold_770_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29509..32544)
DNA (3036bp) protein (1012aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2M4_FRAAD rbh
Oar protein {ECO:0000313|EMBL:AHX13141.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor for ferrienterochelin and colicins rbh
SCNpilot_cont_500_bf_scaffold_770_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32674..33606)
DNA (933bp) protein (311aa)
lacC; putative tagatose-6-phosphate kinase (EC:2.7.1.144); K00917 tagatose 6-phosphate kinase [EC:2.7.1.144]
Phosphofructokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y7_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_770_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33603..34529)
DNA (927bp) protein (309aa)
Putative carbohydrate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y8_9GAMM rbh
Putative carbohydrate kinase {ECO:0000313|EMBL:EIL94179.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative carbohydrate kinase
SCNpilot_cont_500_bf_scaffold_770_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34526..35797)
DNA (1272bp) protein (424aa)
putative tagatose-6-phosphate aldose/ketose isomerase (EC:5.-.-.-); K02082 tagatose-6-phosphate ketose/aldose isomerase [EC:5.-.-.-]
Tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y9_9GAMM rbh
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:EIL94180.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_770_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35824..36741
DNA (918bp) protein (306aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
fructose-bisphosphate aldolase n=1 Tax=Dyella japonica RepID=UPI000371A768 rbh
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AHX14161.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_500_bf_scaffold_770_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36917..38134
DNA (1218bp) protein (406aa)
Amidohydrolase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Z1_9GAMM rbh
Amidohydrolase 2 {ECO:0000313|EMBL:EIL94182.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amidohydrolase 2 rbh
Displaying items 1-30 of 35 in total

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