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SCNpilot_cont_500_bf_scaffold_787

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_787_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1112)
DNA (1110bp) protein (370aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB0_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL88001.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cation/multidrug efflux pump
SCNpilot_cont_500_bf_scaffold_787_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1246..2469)
DNA (1224bp) protein (408aa)
Membrane fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFA3_9GAMM rbh
Membrane fusion protein {ECO:0000313|EMBL:EIL98144.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RND family efflux transporter, MFP subunit rbh
SCNpilot_cont_500_bf_scaffold_787_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2869..3390
DNA (522bp) protein (174aa)
cytochrome C n=1 Tax=Dyella ginsengisoli RepID=UPI0003462BCE
cytochrome c5
Cytochrome c5 {ECO:0000313|EMBL:AGG90806.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_787_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3956..4549)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Rhodanobacter sp. 115 RepID=I4VJR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87452.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_787_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4610..5296
DNA (687bp) protein (229aa)
Putative hydrolase of the alpha/beta superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJR2_9GAMM rbh
Putative hydrolase of the alpha/beta superfamily protein {ECO:0000313|EMBL:EIL87453.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase of the alpha/beta superfamily
SCNpilot_cont_500_bf_scaffold_787_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5412..6539
DNA (1128bp) protein (376aa)
Putative ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N6_9GAMM rbh
putative ATPase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_787_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6637..8448
DNA (1812bp) protein (604aa)
GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV0_9GAMM rbh
EAL domain-containing protein rbh
EAL domain-containing protein {ECO:0000313|EMBL:AGG90810.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_787_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8483..8866
DNA (384bp) protein (128aa)
Peptidase C13, legumain asparaginyl peptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF98_9GAMM
Peptidase C13 {ECO:0000313|EMBL:AHX14958.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_500_bf_scaffold_787_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8911..9456)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF96_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL98137.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_787_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9689..12031)
DNA (2343bp) protein (781aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031B6116 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF45785.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Peptidase S53 propeptide rbh
SCNpilot_cont_500_bf_scaffold_787_11
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12268..13278)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003782DDE
Transcriptional regulator TrmB {ECO:0000313|EMBL:AKH81192.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_787_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13607..14350)
DNA (744bp) protein (248aa)
phosphoglycerate mutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF95_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_787_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14493..15143
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Y1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95572.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_787_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15237..15461
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY32_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_787_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15521..16075)
DNA (555bp) protein (185aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ0_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG90918.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_787_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16143..17519)
DNA (1377bp) protein (459aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKU8_9GAMM rbh
acetyl-CoA acetyltransferase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_787_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17604..18737
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89186.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_787_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18792..19793
DNA (1002bp) protein (334aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ8_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:AHX15370.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_cont_500_bf_scaffold_787_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19797..21374
DNA (1578bp) protein (526aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP6_9GAMM rbh
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL89187.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_cont_500_bf_scaffold_787_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21388..21837)
DNA (450bp) protein (150aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP7_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL89188.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_787_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21995..30598
DNA (8604bp) protein (2868aa)
Cellobiose phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ6_9GAMM rbh
Cellobiose phosphorylase {ECO:0000313|EMBL:AGG90923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
cellobiose phosphorylase rbh
SCNpilot_cont_500_bf_scaffold_787_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30842..31195
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUE5_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED65629.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_787_23
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31563..32309
DNA (747bp) protein (249aa)
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
methionine aminopeptidase n=1 Tax=Singularimonas variicoloris RepID=UPI0003756394 rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_787_24
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32369..32755
DNA (387bp) protein (129aa)
epimerase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A0989D
Uncharacterized protein {ECO:0000313|EMBL:ELT44589.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
hypothetical protein; K08987 putative membrane protein
SCNpilot_cont_500_bf_scaffold_787_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32868..33212
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HVN8_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KGF83322.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_787_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33451..34854
DNA (1404bp) protein (468aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) rbh
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNE0_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_787_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34848..35555
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WND9_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90957.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_787_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35588..36691
DNA (1104bp) protein (368aa)
transaldolase (EC:2.2.1.2) rbh
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Transaldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMT8_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_787_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36688..38355
DNA (1668bp) protein (556aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glucose-6-phosphate isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH7_9GAMM rbh
glucose-6-phosphate isomerase rbh
SCNpilot_cont_500_bf_scaffold_787_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38789..39910
DNA (1122bp) protein (374aa)
Phosphoglucomutase {ECO:0000313|EMBL:EIL90873.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EIL90873.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoglucomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI2_9GAMM
phosphoglucomutase, alpha-D-glucose phosphate-specific
Displaying items 1-30 of 40 in total

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