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SCNpilot_cont_500_bf_scaffold_871

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_871_31
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31820..32395)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZK4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92645.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
YGGT family protein
SCNpilot_cont_500_bf_scaffold_871_32
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32392..33219)
DNA (828bp) protein (276aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBI4_9GAMM
pyrroline-5-carboxylate reductase
SCNpilot_cont_500_bf_scaffold_871_33
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34086..34502
DNA (417bp) protein (139aa)
twitching motility protein PilT n=1 Tax=Dyella ginsengisoli RepID=UPI000345FF9C
Twitching motility protein PilT {ECO:0000313|EMBL:AHX12217.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
pilus retraction ATPase PilT
SCNpilot_cont_500_bf_scaffold_871_34
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34649..35815
DNA (1167bp) protein (389aa)
twitching motility protein PilT n=1 Tax=Dyella ginsengisoli RepID=UPI0003482795 rbh
pilus retraction protein PilT rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_871_35
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35894..37693)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99735.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_871_36
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37813..38739)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aspartate carbamoyltransferase (EC:2.1.3.2) rbh
Aspartate carbamoyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W801_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_871_37
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38736..39185)
DNA (450bp) protein (150aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Putative Holliday junction resolvase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W802_9GAMM
RNAse H-fold protein YqgF
SCNpilot_cont_500_bf_scaffold_871_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39182..39751)
DNA (570bp) protein (190aa)
UPF0301 protein UU7_14745 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV70_9GAMM rbh
UPF0301 protein UU7_14745 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_871_39
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39822..40682)
DNA (861bp) protein (287aa)
TonB family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W805_9GAMM rbh
TonB family protein {ECO:0000313|EMBL:EIL95596.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB family protein rbh
SCNpilot_cont_500_bf_scaffold_871_40
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40679..41641)
DNA (963bp) protein (321aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJT9_9GAMM
SCNpilot_cont_500_bf_scaffold_871_41
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41984..42394
DNA (411bp) protein (137aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ32_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG88023.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_871_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42418..42789
DNA (372bp) protein (124aa)
Two-component system response regulatory protein (PilH) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV66_9GAMM
Two-component system response regulatory protein (PilH) {ECO:0000313|EMBL:EIL91107.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_cont_500_bf_scaffold_871_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42786..43331
DNA (546bp) protein (182aa)
Chemotaxis signal transduction protein pili n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV65_9GAMM
Chemotaxis signal transduction protein pili {ECO:0000313|EMBL:EIL91106.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chemotaxis signal transduction protein
SCNpilot_cont_500_bf_scaffold_871_44
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43458..45488
DNA (2031bp) protein (677aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ29_9GAMM rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG88026.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
methyl-accepting chemotaxis protein rbh
SCNpilot_cont_500_bf_scaffold_871_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45570..51653
DNA (6084bp) protein (2028aa)
CheA signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV63_9GAMM rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EIL91104.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chemotaxis protein histidine kinase-like protein
SCNpilot_cont_500_bf_scaffold_871_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51646..53184
DNA (1539bp) protein (513aa)
Protein-glutamate methylesterase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJT3_9GAMM
Protein-glutamate methylesterase {ECO:0000313|EMBL:EIL99724.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain rbh
SCNpilot_cont_500_bf_scaffold_871_47
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53181..53678
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9X8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96269.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
chemotaxis signal transduction protein
SCNpilot_cont_500_bf_scaffold_871_48
unknown

Not on your lists

53678..53842
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_871_49
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53854..54588)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ25_9GAMM rbh
RNA methyltransferase, RsmE family rbh
SCNpilot_cont_500_bf_scaffold_871_50
unknown

Not on your lists

54728..55042
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_871_51
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55070..56434)
DNA (1365bp) protein (455aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS5_9GAMM
adenosylmethionine-8-amino-7-oxononanoate transaminase
SCNpilot_cont_500_bf_scaffold_871_52
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56538..57293
DNA (756bp) protein (252aa)
Type II secretion system protein N (GspN) n=1 Tax=Rhodanobacter denitrificans RepID=M4NES4_9GAMM
type II secretion system protein N (GspN)
Type II secretion system protein N (GspN) {ECO:0000313|EMBL:AGG88033.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_871_53
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57290..58069
DNA (780bp) protein (260aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Y2_9GAMM rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIL96273.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
SCNpilot_cont_500_bf_scaffold_871_54
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58134..58691
DNA (558bp) protein (186aa)
Adenosine nucleotide hydrolase NudE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZI1_9GAMM
Adenosine nucleotide hydrolase NudE {ECO:0000313|EMBL:EIL92622.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ADP-ribose pyrophosphatase
SCNpilot_cont_500_bf_scaffold_871_55
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58688..59509
DNA (822bp) protein (274aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Y4_9GAMM rbh
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EIL96275.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_871_56
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59506..60312
DNA (807bp) protein (269aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EIL96276.1}; EC=3.6.1.19 {ECO:0000313|EMBL:EIL96276.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Y5_9GAMM rbh
MazG family protein
SCNpilot_cont_500_bf_scaffold_871_57
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60421..61194
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJS2_9GAMM
Protein of unknown function (DUF2807)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_871_58
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61231..62382)
DNA (1152bp) protein (384aa)
Na+/H+ antiporter NhaD-like permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W921_9GAMM rbh
Na+/H+ antiporter NhaD-like permease {ECO:0000313|EMBL:EIL95962.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Na+/H+ antiporter NhaD-like permease rbh
SCNpilot_cont_500_bf_scaffold_871_59
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62411..63040)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346913A
Glutathione S-transferase {ECO:0000313|EMBL:EIL90020.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutathione S-transferase
SCNpilot_cont_500_bf_scaffold_871_60
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63086..65569)
DNA (2484bp) protein (828aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ14_9GAMM rbh
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component {ECO:0000313|EMBL:AGG88041.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component rbh
Displaying items 31-60 of 60 in total

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