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SCNpilot_cont_500_bf_scaffold_1756

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1756_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..407
DNA (405bp) protein (135aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAZ4_9GAMM
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:EIL96635.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
SCNpilot_cont_500_bf_scaffold_1756_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(424..777)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8P5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95836.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1756_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(774..2609)
DNA (1836bp) protein (612aa)
Fe2+ transport system protein B n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8P4_9GAMM rbh
Fe2+ transport system protein B {ECO:0000313|EMBL:EIL95835.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Fe2+ transport system protein B rbh
SCNpilot_cont_500_bf_scaffold_1756_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2606..2896)
DNA (291bp) protein (97aa)
Fe2+ transport system protein A n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU5_9GAMM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:AGG88386.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1756_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2974..3765
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003482A53 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIL88864.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
enoyl-CoA hydratase/carnithine racemase
SCNpilot_cont_500_bf_scaffold_1756_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3864..5852
DNA (1989bp) protein (663aa)
acetyl/propionyl-CoA carboxylase, alpha subunit (EC:6.3.4.14 6.4.1.4)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X3_9GAMM
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:EIL94864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_1756_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5886..6788
DNA (903bp) protein (301aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA74_9GAMM rbh
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIL96365.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
isopropylmalate/homocitrate/citramalate synthase
SCNpilot_cont_500_bf_scaffold_1756_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6881..7351)
DNA (471bp) protein (157aa)
ADP-ribose pyrophosphatase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKT8_9GAMM
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AGG88381.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1756_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7348..7983)
DNA (636bp) protein (212aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCG8_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG88380.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1756_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8041..8529
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTQ0_9GAMM
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AGG88379.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1756_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..9141
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5W9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94860.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1756_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9135..9725
DNA (591bp) protein (197aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP8_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL88102.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
sortase-like acyltransferase
SCNpilot_cont_500_bf_scaffold_1756_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9951..10421)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WML1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00703.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative integral membrane protein
SCNpilot_cont_500_bf_scaffold_1756_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10629..11396
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL2_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL88103.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCNpilot_cont_500_bf_scaffold_1756_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11500..12063
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK9_9GAMM rbh
Elongation factor P {ECO:0000313|EMBL:EIM00701.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
translation elongation factor P/translation initiation factor 5A rbh
SCNpilot_cont_500_bf_scaffold_1756_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12132..14186
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP4_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88373.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_1756_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14257..15279
DNA (1023bp) protein (341aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK7_9GAMM rbh
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:EIM00699.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative TIM-barrel fold metal-dependent hydrolase rbh
SCNpilot_cont_500_bf_scaffold_1756_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15289..15810
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00698.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1756_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15839..17119
DNA (1281bp) protein (427aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W915_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_1756_20
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17130..17693)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091K7_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE64412.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1756_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17678..18991)
DNA (1314bp) protein (438aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
Gamma-glutamyl phosphate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTN7_9GAMM
SCNpilot_cont_500_bf_scaffold_1756_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18988..20166)
DNA (1179bp) protein (393aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamate 5-kinase n=1 Tax=Dyella japonica RepID=UPI0002FD5554 rbh
glutamate 5-kinase
SCNpilot_cont_500_bf_scaffold_1756_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20178..21473)
DNA (1296bp) protein (432aa)
Argininosuccinate lyase {ECO:0000313|EMBL:EIM01586.1}; EC=4.3.2.1 {ECO:0000313|EMBL:EIM01586.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Argininosuccinate lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ44_9GAMM
argininosuccinate lyase
SCNpilot_cont_500_bf_scaffold_1756_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21487..22443)
DNA (957bp) protein (319aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|SAAS:SAAS00137393}; EC=1.2.1.38 {ECO:0000256|SAAS:SAAS00137393};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTN4_9GAMM
SCNpilot_cont_500_bf_scaffold_1756_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22451..23794)
DNA (1344bp) protein (448aa)
Acetylglutamate kinase {ECO:0000313|EMBL:EIM01584.1}; EC=2.7.2.8 {ECO:0000313|EMBL:EIM01584.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ42_9GAMM
SCNpilot_cont_500_bf_scaffold_1756_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23791..24936)
DNA (1146bp) protein (382aa)
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase (EC:3.5.1.-)
Acetylornithine deacetylase {ECO:0000313|EMBL:EIL88844.1}; EC=3.5.1.16 {ECO:0000313|EMBL:EIL88844.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Acetylornithine deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTN2_9GAMM
SCNpilot_cont_500_bf_scaffold_1756_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24936..26051)
DNA (1116bp) protein (372aa)
Argininosuccinate synthase {ECO:0000256|SAAS:SAAS00214603}; EC=6.3.4.5 {ECO:0000256|SAAS:SAAS00009947};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNQ2_9GAMM
SCNpilot_cont_500_bf_scaffold_1756_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26080..26553)
DNA (474bp) protein (158aa)
peroxiredoxin n=1 Tax=Dyella ginsengisoli RepID=UPI0003459414
Uncharacterized protein {ECO:0000313|EMBL:EIM01580.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative redox protein, regulator of disulfide bond formation
SCNpilot_cont_500_bf_scaffold_1756_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26550..27173)
DNA (624bp) protein (208aa)
Negative transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ37_9GAMM
Negative transcriptional regulator {ECO:0000313|EMBL:EIM01579.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1756_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27180..28187)
DNA (1008bp) protein (336aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:EIM03502.1}; EC=2.1.3.9 {ECO:0000313|EMBL:EIM03502.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ornithine carbamoyltransferase (EC:2.1.3.9)
N-acetylornithine carbamoyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVL0_9GAMM rbh
Displaying items 1-30 of 45 in total

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