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SCNpilot_cont_500_bf_scaffold_692_10

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: 9724..10062

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZW6_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 205
  • Evalue 3.80e-50
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 205
  • Evalue 1.20e-50
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 205
  • Evalue 5.40e-50

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Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGAATCGCGCCTGTCCGGCCGCGACATCGGCTTCGAGGCGCCGGCGGACGCCGACGACGACGCCAGGCCCGCACCCGAGGCGTTCCTGGTCGACGAAGGCGCCGACCCGTACGACAACGTGGCCGCGGCCGACCAGTCGGACAACGAGCTGACCACGCTGTCCGCCGCGATGGGCAAGCTGGACGAGCGCTCGCGCCACATCATCCAGCGCCGCTGGCTGGACGACGACAAGGCCACGCTGCAGGAACTGGCCGACGAGTACGGCGTGTCCGCCGAGCGCATCCGCCAGGTCGAGGCGAACGCGATGAAGAAGATGCGCGGGCTGTTCGCGGCCTGA
PROTEIN sequence
Length: 113
MESRLSGRDIGFEAPADADDDARPAPEAFLVDEGADPYDNVAAADQSDNELTTLSAAMGKLDERSRHIIQRRWLDDDKATLQELADEYGVSAERIRQVEANAMKKMRGLFAA*