name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_692_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..691)
|
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Transcription termination factor Rho n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP9_9GAMM
transcription termination factor Rho
|
|
SCNpilot_cont_500_bf_scaffold_692_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(853..1179)
|
thioredoxin n=1 Tax=Dyella japonica RepID=UPI0003117BA4
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
thioredoxin
|
|
SCNpilot_cont_500_bf_scaffold_692_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1601..3337
|
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent RNA helicase RhlB n=2 Tax=Rhodanobacter denitrificans RepID=M4NKJ1_9GAMM
rbh
DNA/RNA helicase, superfamily II
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3454..4131
|
Cell division ATP-binding protein FtsE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ36_9GAMM
rbh
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EIL89327.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cell division ATP-binding protein FtsE
|
|
SCNpilot_cont_500_bf_scaffold_692_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4128..5108
|
Cell division protein FtsX n=1 Tax=Rhodanobacter denitrificans RepID=I4WX89_9GAMM
rbh
cell division protein
rbh
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_cont_500_bf_scaffold_692_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5135..5977
|
Two-component system response regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ34_9GAMM
rbh
Two-component system response regulator {ECO:0000313|EMBL:EIL89325.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator containing a CheY-like receiver domain and a GGDEF domain
|
|
SCNpilot_cont_500_bf_scaffold_692_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5974..6672
|
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Uracil-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX87_9GAMM
|
|
SCNpilot_cont_500_bf_scaffold_692_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6673..7356)
|
PKHD-type hydroxylase UU5_02012 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
PKHD-type hydroxylase UU5_02012 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNJ7_9GAMM
rbh
putative iron-regulated protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_9
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7555..9204
|
ABC transporter ATP-binding protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036C8241
rbh
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CAP63491.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
|
|
SCNpilot_cont_500_bf_scaffold_692_10
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9724..10062
|
RNA polymerase sigma factor RpoH n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZW6_FRAAD
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
|
|
SCNpilot_cont_500_bf_scaffold_692_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10144..11409)
|
ndh; putative pyridine nucleotide-disulphide oxidoreductase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DD2733
rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AHX14724.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
|
|
SCNpilot_cont_500_bf_scaffold_692_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11435..13627)
|
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Primosome assembly protein PriA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE31_9GAMM
rbh
replication restart DNA helicase PriA
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14032..15207)
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTU7_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02889.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Protein of unknown function (DUF3667)
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15303..16715
|
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR59_9GAMM
rbh
Putative efflux protein, MATE family {ECO:0000313|EMBL:EIL89700.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative efflux protein, MATE family
|
|
SCNpilot_cont_500_bf_scaffold_692_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16766..18670
|
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal peptide peptidase SppA, 67K type n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB5_9GAMM
signal peptide peptidase SppA, 67K type
|
|
SCNpilot_cont_500_bf_scaffold_692_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18686..19507)
|
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
rbh
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUX3_9GAMM
rbh
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA {ECO:0000313|EMBL:EIL91014.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
|
|
SCNpilot_cont_500_bf_scaffold_692_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19580..19804)
|
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUX4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91015.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_692_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19886..20665
|
Tropinone reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUX5_9GAMM
rbh
Tropinone reductase {ECO:0000313|EMBL:EIL91016.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_19
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20673..21311)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D751D9
Uncharacterized protein {ECO:0000313|EMBL:AIF49486.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
|
|
SCNpilot_cont_500_bf_scaffold_692_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21344..22288)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTQ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90594.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EDD domain protein, DegV family
|
|
SCNpilot_cont_500_bf_scaffold_692_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22462..23247
|
AMP nucleosidase {ECO:0000313|EMBL:EIL87248.1}; EC=3.2.2.4 {ECO:0000313|EMBL:EIL87248.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AMP nucleosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJ57_9GAMM
rbh
AMP nucleosidase, putative
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_22
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23929..26877
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DDD1CA
rbh
TonB-dependent receptor {ECO:0000313|EMBL:AIF49482.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
outer membrane cobalamin receptor protein
|
|
SCNpilot_cont_500_bf_scaffold_692_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26946..28778
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F9D6BB
rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF49481.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
sulfotransferase family protein
|
|
SCNpilot_cont_500_bf_scaffold_692_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28803..30377)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000360EA2F
rbh
Sulfotransferase {ECO:0000313|EMBL:EIL97712.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfotransferase family protein
|
|
SCNpilot_cont_500_bf_scaffold_692_25
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30374..31951)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000373DA56
rbh
Sulfotransferase {ECO:0000313|EMBL:AIF49480.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
tetratricopeptide repeat protein,sulfotransferase family protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_26
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32117..33433
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037F214E
rbh
Aspartyl beta-hydroxylase {ECO:0000313|EMBL:AIF49479.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_692_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33607..35211
|
TPR repeat-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP80_9GAMM
rbh
TPR repeat-containing protein {ECO:0000313|EMBL:EIL89021.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
tetratricopeptide repeat protein,sulfotransferase family protein
|
|
SCNpilot_cont_500_bf_scaffold_692_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35312..38473)
|
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP79_9GAMM
rbh
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL89020.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane receptor protein
|
|
SCNpilot_cont_500_bf_scaffold_692_29
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39265..40188)
|
Glutaredoxin-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE18_9GAMM
rbh
monothiol glutaredoxin, Grx4 family
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_cont_500_bf_scaffold_692_30
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40249..40863)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003073669
Lysophospholipase {ECO:0000313|EMBL:AIF46725.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
lysophospholipase L1-like esterase
|