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SCNpilot_cont_500_bf_scaffold_723_3

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: 2832..3431

Top 3 Functional Annotations

Value Algorithm Source
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 199.0
  • Bit_score: 249
  • Evalue 3.10e-63
Transcriptional regulator {ECO:0000313|EMBL:EYR67012.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 195.0
  • Bit_score: 249
  • Evalue 4.40e-63
two-component system regulatory protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 192.0
  • Bit_score: 223
  • Evalue 5.80e-56

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGTCGATGGCATGGACGATACCCTCGACGCCTGGTTCATCCGCGAGATCGTGGTGCACGAAGCCGCCCTGACGCGGTTGTTGCAGCGCATCTGCCTGCAGCGCGACGACGTCCACGACCTGCGCCAGGAAGTCTATGTGCGCGTCTACGAGGCAGCGGGCAAGAACCTGCCGACGCAGCCCAAGGCCTTCCTGTTCTCCACCGCACGCCATCTGGTCACCGATCGGCTGCGTCGCAGCCGCGTGGTGGCCATCGACGCCGTGGGGGATATCGACGCCCTGAACGTCTTGATCGATGAGATCTCGCCGGAGCGCCGGCTGGACGGGCGGCAGATCCTCAAACGGCTTGCCGATGCCTTCGACCAGTTGCCGGCGCGCTGTCGCGAGGTGGTCTGGATGCGCAAGGTGCAGGAACTGCCGCAGAAGGTCGTGGCCGAACAACTCAGAATTACCGAGAAAACGGTGGAGAAACAGGTCGCCAAGGGAGTCAGGCTGATCGCCGACCACTTCTACGGCGAGGGTGTCGGCCACCGCGCTGCGCCGCAGCAACATGCCTCATTGCCGAACGAAGCAGTCCATGGTCAGCAGCCGACAGATTGA
PROTEIN sequence
Length: 200
MVDGMDDTLDAWFIREIVVHEAALTRLLQRICLQRDDVHDLRQEVYVRVYEAAGKNLPTQPKAFLFSTARHLVTDRLRRSRVVAIDAVGDIDALNVLIDEISPERRLDGRQILKRLADAFDQLPARCREVVWMRKVQELPQKVVAEQLRITEKTVEKQVAKGVRLIADHFYGEGVGHRAAPQQHASLPNEAVHGQQPTD*