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SCNpilot_cont_500_bf_scaffold_871_21

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: comp(21706..22260)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 185.0
  • Bit_score: 250
  • Evalue 1.80e-63
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 175.0
  • Bit_score: 249
  • Evalue 7.00e-64
Shikimate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ54_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 185.0
  • Bit_score: 255
  • Evalue 5.30e-65

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAATCCGTCGCGCAACCTGTTCCTGATCGGCCCCACCGGCGCGGGCAAGACCTCGGTCGGCCAGCGCCTCGCCGCGCATTACGGCCTCGCCTTCGTGGATCTCGACCGCGAGATCGAGCAGCACACCGGCACCGACATCAACACCGTGTTCGCGATCGAGGGCGAGGCCGGCTTCCGCCAGCGCGAGAGCACGCTGCTGGACGAATGCAGCGCCCGCGACGACGTGCTGCTGGCCACCGGCGCCGGCGCCGTGCTCGATCCGCGCAACCGCGAGTTGCTCCGGGCGCGCGGCTACGTGCTGTGGCTGCAGGCGGACGTGGCGCAGCAGCTGAAGCGGCTGGAACACGACACCCGGCGACCGCTGCTGGCCGGCACGGATCGCCGCAGCCGCCTCGAGGCGATGGCCGCCGTGCGCGAACCGCTGTACCGCGACACTGCCGATCTCGCGCTGCCCGCCGCCCGCGGCATCGCGGCCATCTGCACCGACGCCATCGCGCTGATCGACCGGCATTGGCAACGCCCTCCCCTTCCGACGCCCGCACCCACCGCATGA
PROTEIN sequence
Length: 185
MNPSRNLFLIGPTGAGKTSVGQRLAAHYGLAFVDLDREIEQHTGTDINTVFAIEGEAGFRQRESTLLDECSARDDVLLATGAGAVLDPRNRELLRARGYVLWLQADVAQQLKRLEHDTRRPLLAGTDRRSRLEAMAAVREPLYRDTADLALPAARGIAAICTDAIALIDRHWQRPPLPTPAPTA*