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SCNpilot_cont_500_bf_scaffold_4134

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4134_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..391)
DNA (390bp) protein (130aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Alanine--tRNA ligase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=SYA_NITWN
SCNpilot_cont_500_bf_scaffold_4134_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

889..1962
DNA (1074bp) protein (358aa)
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Aminomethyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMV8_NITHX
SCNpilot_cont_500_bf_scaffold_4134_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1973..2338
DNA (366bp) protein (122aa)
Glycine cleavage system H protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMV9_NITHX
glycine cleavage system protein H; K02437 glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2408..5284
DNA (2877bp) protein (959aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000255|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000255|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000255|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000255|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000255|HAMAP-Rule:MF_00711}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2]
Glycine dehydrogenase (decarboxylating) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GCSP_NITHX
SCNpilot_cont_500_bf_scaffold_4134_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5818..6906)
DNA (1089bp) protein (363aa)
Protein RecA n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RECA_NITWN
recA; recombinase A; K03553 recombination protein RecA
Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268}; Recombinase A {ECO:0000255|HAMAP-Rule:MF_00268}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_4134_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7162..7299
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2K1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33540.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_4134_7
unknown

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7458..7658
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4134_8
unknown

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8084..8272
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4134_9
unknown

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8315..8485
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4134_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8833..9276)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN51_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62346.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_11
unknown

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comp(9468..9569)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4134_12
unknown

Not on your lists

9747..9929
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4134_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10382..10669)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN53_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62344.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_14
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10707..10961)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRX1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG62527.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_500_bf_scaffold_4134_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11318..12544
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN54_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62343.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12541..13338
DNA (798bp) protein (266aa)
Transcription factor jumonji, jmjC n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST58_NITWN
transcription factor jumonji, jmjC
Transcription factor jumonji, jmjC {ECO:0000313|EMBL:ABA04533.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_4134_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13794..14477
DNA (684bp) protein (228aa)
Peptidase M50 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN56_NITHX
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ABE62341.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..15705)
DNA (792bp) protein (264aa)
Outer membrane transport energization protein TonB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN58_NITHX
TonB-like
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABE62339.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15709..16179)
DNA (471bp) protein (157aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT12_9BRAD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EAQ36843.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_500_bf_scaffold_4134_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16183..17145)
DNA (963bp) protein (321aa)
Outer membrane transport energization protein ExbB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN60_NITHX rbh
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB rbh
Outer membrane transport energization protein ExbB {ECO:0000313|EMBL:ABE62337.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17155..17844)
DNA (690bp) protein (230aa)
hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-] rbh
PKHD-type hydroxylase Nham_1514 {ECO:0000255|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000255|HAMAP-Rule:MF_00657};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PKHD-type hydroxylase Nham_1514 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y1514_NITHX rbh
SCNpilot_cont_500_bf_scaffold_4134_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17871..20432)
DNA (2562bp) protein (854aa)
TonB-dependent receptor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN62_NITHX
TonB-dependent receptor {ECO:0000313|EMBL:ABE62335.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_4134_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20692..20931)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN63_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62334.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21078..21554)
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN64_NITHX
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABE62333.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21691..22851
DNA (1161bp) protein (387aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN65_NITHX
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE62332.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4134_26
unknown

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22912..22986
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 26 items

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