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SCNpilot_cont_500_bf_scaffold_2077

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2077_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..141
DNA (141bp) protein (47aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Ketol-acid reductoisomerase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=ILVC_NITWN
SCNpilot_cont_500_bf_scaffold_2077_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(221..979)
DNA (759bp) protein (253aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJU9_NITHX
substrate-binding region of ABC-type glycine betaine transport system
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ABE63498.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1699..2490)
DNA (792bp) protein (264aa)
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJV0_NITHX
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABE63497.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2668..3372
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJV1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63496.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3832..5394
DNA (1563bp) protein (521aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] rbh
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
2-isopropylmalate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LEU1_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2077_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5510..6091
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJV4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63493.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_trna_1
unknown

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6260..6332
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2077_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6762..7133)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QVB0_METTR
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCJ05849.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_500_bf_scaffold_2077_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8205..8540)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63486.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8578..9030
DNA (453bp) protein (151aa)
MaoC-like dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW2_NITHX
MaoC-like dehydratase
MaoC-like dehydratase {ECO:0000313|EMBL:ABE63485.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..9902
DNA (876bp) protein (292aa)
citrate lyase (EC:4.1.3.6); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
Citrate lyase {ECO:0000313|EMBL:ABE63484.1}; EC=4.1.3.6 {ECO:0000313|EMBL:ABE63484.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Citrate lyase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW3_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2077_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..11236)
DNA (1275bp) protein (425aa)
Beta-lactamase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW4_NITHX rbh
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:ABE63483.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11460..12680
DNA (1221bp) protein (407aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW5_NITHX
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABE63482.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12925..14184
DNA (1260bp) protein (420aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] rbh
Glutamate dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW6_NITHX rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14342..15028
DNA (687bp) protein (229aa)
Transcriptional regulator, TetR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW7_NITHX
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABE63480.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15030..16241
DNA (1212bp) protein (404aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW8_NITHX rbh
secretion protein HlyD rbh
Secretion protein HlyD {ECO:0000313|EMBL:ABE63479.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2077_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16338..16733
DNA (396bp) protein (132aa)
Acriflavin resistance protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJW9_NITHX
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABE63478.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 17 items

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