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SCNpilot_cont_500_bf_scaffold_2927

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2927_1
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20..310
DNA (291bp) protein (97aa)
antirepressor n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E416B3
ardC; antirestriction protein ArdC
Antirestriction protein ArdC {ECO:0000313|EMBL:BAI99166.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_cont_500_bf_scaffold_2927_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

307..678
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQR4_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05377.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2927_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(918..1388)
DNA (471bp) protein (157aa)
Resolvase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNP8_NITWN
resolvase
Resolvase {ECO:0000313|EMBL:ABA06093.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2927_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1404..1973)
DNA (570bp) protein (190aa)
GCN5-related N-acetyltransferase n=5 Tax=Rhizobium meliloti RepID=F6BMR4_SINMB rbh
N-acetyltransferase GCN5 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAC46470.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_500_bf_scaffold_2927_5
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1966..2256)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI000379CB67
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG04555.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
SCNpilot_cont_500_bf_scaffold_2927_6
unknown

Not on your lists

comp(2317..2532)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2927_7
bacterium YEK0313, Bacteria

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2848..3207
DNA (360bp) protein (120aa)
Conjugal transfer protein traD n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E979_BRASB
Conjugal transfer protein TraD {ECO:0000313|EMBL:CEJ12902.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
conjugal transfer protein traD
SCNpilot_cont_500_bf_scaffold_2927_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3179..4222)
DNA (1044bp) protein (348aa)
Periplasmic binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JCX9_OLICO rbh
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
Periplasmic binding protein {ECO:0000313|EMBL:AEI08053.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_2927_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4250..5089)
DNA (840bp) protein (280aa)
Methyltransferase type 12 n=2 Tax=Oligotropha carboxidovorans RepID=B6JCX8_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08054.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_2927_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5100..7364)
DNA (2265bp) protein (755aa)
TonB-dependent siderophore receptor n=2 Tax=Oligotropha carboxidovorans RepID=B6JCX7_OLICO rbh
TonB-dependent siderophore receptor rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AEI08055.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_2927_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8028..8918
DNA (891bp) protein (297aa)
Transport system permease protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPP0_NITHX
transport system permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ABE61807.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2927_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8971..9825
DNA (855bp) protein (285aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPN9_NITHX
ABC transporter related protein {ECO:0000313|EMBL:ABE61808.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2927_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10388..11824
DNA (1437bp) protein (479aa)
ParB-like partition protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PN47_9BRAD
ParB-like partition protein {ECO:0000313|EMBL:EKS40920.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_500_bf_scaffold_2927_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11845..12483
DNA (639bp) protein (213aa)
ParB domain protein nuclease n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4W7_9BRAD
ParB domain protein nuclease {ECO:0000313|EMBL:EFI52997.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ParB domain-containing protein nuclease
SCNpilot_cont_500_bf_scaffold_2927_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12879..13163
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BI21_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59800.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_2927_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13156..13908
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J377_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ82023.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_2927_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13730..14119)
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PilT protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J9Y4_AGRRK
PilT protein
SCNpilot_cont_500_bf_scaffold_2927_18
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14106..14381)
DNA (276bp) protein (92aa)
Transcriptional regulator, AbrB family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBY4_MESOW
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:AEH90026.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_2927_19
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14544..14915
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N76_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61132.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_2927_20
unknown

Not on your lists

14908..15213
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2927_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15408..15986
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS1_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54059.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_2927_22
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16169..19897
DNA (3729bp) protein (1243aa)
TonB-dependent siderophore receptor n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN48_NITWN
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABA06293.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2927_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20082..20609
DNA (528bp) protein (176aa)
PepSY-associated membrane protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X073_9BRAD
PepSY-associated membrane protein {ECO:0000313|EMBL:EAQ34364.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
Displaying 23 items

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