ggKbase home page

SCNpilot_cont_500_bf_scaffold_15969

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_15969_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

827..2041
DNA (1215bp) protein (405aa)
branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.61); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] rbh
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Dihydrolipoamide acetyltransferase, long form n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMI1_NITHX rbh
SCNpilot_cont_500_bf_scaffold_15969_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2115..2891
DNA (777bp) protein (259aa)
lpd1; dihydrolipoyl dehydrogenase Lpd (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9J0_9BRAD
SCNpilot_cont_500_bf_scaffold_15969_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2888..3490
DNA (603bp) protein (201aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Dihydrolipoyl dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMI0_NITHX
SCNpilot_cont_500_bf_scaffold_15969_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3856..4134
DNA (279bp) protein (93aa)
dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Dihydroxy-acid dehydratase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214Z1_RHOPB
SCNpilot_cont_500_bf_scaffold_15969_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4121..4945
DNA (825bp) protein (275aa)
Sel1-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMH9_NITHX
Sel1-like; K07126
Sel1-like protein {ECO:0000313|EMBL:ABE62568.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_15969_6
unknown

Not on your lists

comp(4954..5055)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_15969_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5107..6213)
DNA (1107bp) protein (369aa)
exodeoxyribonuclease III (xth); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ABE62569.1}; EC=3.1.11.2 {ECO:0000313|EMBL:ABE62569.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Exodeoxyribonuclease III n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMH8_NITHX rbh
SCNpilot_cont_500_bf_scaffold_15969_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6337..7539
DNA (1203bp) protein (401aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=DGTL1_NITHX
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000255|HAMAP-Rule:MF_01212}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_15969_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7578..7745
DNA (168bp) protein (56aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Arginine--tRNA ligase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=SYR_NITWN
Displaying 9 items

View Taxonomy