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SCNpilot_cont_500_bf_scaffold_291

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_291_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..173
DNA (171bp) protein (57aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 2
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQP1_NITWN
SCNpilot_cont_500_bf_scaffold_291_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

876..1295
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKC1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63326.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_291_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1318..1722)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V8C0_9RHIZ
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45288.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_500_bf_scaffold_291_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1742..2530
DNA (789bp) protein (263aa)
tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
tRNA and rRNA cytosine-C5-methylase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQP3_NITWN
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:ABA05398.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_291_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2621..4180
DNA (1560bp) protein (520aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
GMP synthase [glutamine-hydrolyzing] {ECO:0000255|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000255|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000255|HAMAP-Rule:MF_00344}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GUAA_NITHX rbh
SCNpilot_cont_500_bf_scaffold_291_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4495..5754
DNA (1260bp) protein (420aa)
Integrase n=2 Tax=Oligotropha carboxidovorans RepID=B6JHM2_OLICO rbh
integrase rbh
Integrase {ECO:0000313|EMBL:AEI06300.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6553..8715
DNA (2163bp) protein (721aa)
ParB-like nuclease n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNN2_NITWN rbh
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family rbh
ParB-like nuclease {ECO:0000313|EMBL:ABA06109.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_291_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..9180
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BKM0_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06303.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9177..9548
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHL8_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06304.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9612..10025
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2Z9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33391.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_291_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11013..11324
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2Z7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33389.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_291_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11695..12891
DNA (1197bp) protein (399aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHL3_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06307.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13102..13299)
DNA (198bp) protein (66aa)
Transcriptional regulator, XRE family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X301_9BRAD
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:EAQ33386.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_291_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13469..13732
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHL1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06309.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_15
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14124..14669
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JHL0_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI14390.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
SCNpilot_cont_500_bf_scaffold_291_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14788..15030
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUD2_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04109.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_291_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15039..15902
DNA (864bp) protein (288aa)
Putative replication protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK8_OLICO rbh
putative replication protein rbh
Putative replication protein {ECO:0000313|EMBL:AEI06312.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15899..16429
DNA (531bp) protein (177aa)
DNA methylase; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
DNA methylase n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK7_OLICO
DNA methylase {ECO:0000313|EMBL:AEI06313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16426..16920
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK6_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06314.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_20
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16917..17477
DNA (561bp) protein (187aa)
Conjugal transfer protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC8_NITWN
conjugal transfer protein precursor
Conjugal transfer protein {ECO:0000313|EMBL:ABA04113.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_291_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17513..17842
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06316.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17882..18121
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06317.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_23
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18126..19061
DNA (936bp) protein (312aa)
Lytic transglycosylase, catalytic n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUC7_NITWN rbh
lytic transglycosylase, catalytic rbh
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABA04114.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_291_24
unknown

Not on your lists

19058..19303
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_291_25
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19300..21036
DNA (1737bp) protein (579aa)
Type IV secretory pathway VirD2 components n=2 Tax=Oligotropha carboxidovorans RepID=B6JHK0_OLICO
type IV secretory pathway VirD2 components
Uncharacterized protein {ECO:0000313|EMBL:AEI06319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21090..21374
DNA (285bp) protein (95aa)
Prevent-host-death family protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FTC9_RHIML
Prevent-host-death family protein {ECO:0000313|EMBL:EHK79817.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
prevent-host-death family protein
SCNpilot_cont_500_bf_scaffold_291_27
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21376..21813
DNA (438bp) protein (146aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Ribonuclease VapC n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2M2_9RHIZ
twitching motility protein PilT; K07062
SCNpilot_cont_500_bf_scaffold_291_28
unknown

Not on your lists

21910..22299
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_291_29
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22375..24396
DNA (2022bp) protein (674aa)
Conjugal transfer protein traG n=2 Tax=Oligotropha carboxidovorans RepID=B6JHJ8_OLICO rbh
traG3; conjugal transfer protein traG; K03205 type IV secretion system protein VirD4 rbh
Conjugal transfer protein traG {ECO:0000313|EMBL:AEI06321.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_291_30
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24400..24858
DNA (459bp) protein (153aa)
CopG-like domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JHJ7_OLICO
CopG family transcriptional regulator {ECO:0000313|EMBL:KIJ70711.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
CopG-like domain-containing protein
Displaying items 1-30 of 163 in total

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