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SCNpilot_cont_500_bf_scaffold_17189

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_17189_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..280)
DNA (279bp) protein (93aa)
NusA antitermination factor n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWQ1_NITWN
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_17189_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(284..1063)
DNA (780bp) protein (260aa)
Ribosome maturation factor RimP n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RIMP_NITWN rbh
hypothetical protein; K09748 ribosome maturation factor RimP rbh
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_17189_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1245..1892)
DNA (648bp) protein (216aa)
haloacid dehalogenase n=1 Tax=Promicromonospora sukumoe RepID=UPI00036525B7
Uncharacterized protein {ECO:0000313|EMBL:GAJ91145.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hydrolase
SCNpilot_cont_500_bf_scaffold_17189_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1919..2341)
DNA (423bp) protein (141aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT41_9BRAD
SCNpilot_cont_500_bf_scaffold_17189_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2653..3072)
DNA (420bp) protein (140aa)
Transcriptional regulator, XRE family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT40_9BRAD
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:EAQ37174.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_17189_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3262..4866)
DNA (1605bp) protein (535aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] rbh
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Apolipoprotein N-acyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS70_NITHX rbh
SCNpilot_cont_500_bf_scaffold_17189_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4863..5177)
DNA (315bp) protein (105aa)
CBS:transporter-associated n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS71_NITHX
transporter
CBS:transporter-associated {ECO:0000313|EMBL:ABE60926.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_17189_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5174..5938)
DNA (765bp) protein (255aa)
CBS:transporter-associated n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS71_NITHX
transporter
CBS:transporter-associated {ECO:0000313|EMBL:ABE60926.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_17189_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5944..6510)
DNA (567bp) protein (189aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Endoribonuclease YbeY n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=YBEY_NITHX
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_cont_500_bf_scaffold_17189_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6507..7034)
DNA (528bp) protein (176aa)
PhoH-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS73_NITHX
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
PhoH-like protein {ECO:0000313|EMBL:ABE60924.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 10 items

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