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SCNpilot_cont_500_bf_scaffold_11037

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11037_1
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..107
DNA (105bp) protein (35aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QS70_9BRAD
livH; high-affinity branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Branched-chain amino acid transporter permease subunit LivH {ECO:0000313|EMBL:KJC39712.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCNpilot_cont_500_bf_scaffold_11037_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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118..1503
DNA (1386bp) protein (462aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK53_NITHX rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein rbh
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABE63394.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11037_3
unknown

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comp(1667..1924)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_11037_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1999..2235
DNA (237bp) protein (79aa)
ABC transporter ATPase (EC:3.6.3.29); K01995 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ABA05465.1}; EC=3.6.3.29 {ECO:0000313|EMBL:ABA05465.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQH6_NITWN
SCNpilot_cont_500_bf_scaffold_11037_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2276..3721
DNA (1446bp) protein (482aa)
amino acid ABC transporter ATPase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000366FF9A
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43523.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_11037_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3829..4260
DNA (432bp) protein (144aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK50_NITHX
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE63397.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11037_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4723..5457)
DNA (735bp) protein (245aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WX86_9BRAD
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:EAQ35402.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
SCNpilot_cont_500_bf_scaffold_11037_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5917..6915
DNA (999bp) protein (333aa)
Peptidase S58, DmpA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK48_NITHX rbh
peptidase S58, DmpA rbh
Peptidase S58, DmpA {ECO:0000313|EMBL:ABE63399.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11037_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7138..7392
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK47_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63400.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11037_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7437..8591)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK46_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE63401.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11037_11
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8776..9513)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YRX7_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL76653.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_500_bf_scaffold_11037_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9773..9964
DNA (192bp) protein (64aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK45_NITHX
Displaying 12 items

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