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SCNpilot_cont_500_bf_scaffold_11865

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11865_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..2375
DNA (2373bp) protein (791aa)
DNA polymerase I {ECO:0000313|EMBL:ABE61343.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABE61343.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR04_NITHX
SCNpilot_cont_500_bf_scaffold_11865_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2742..3296
DNA (555bp) protein (185aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Orotate phosphoribosyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR06_NITHX
SCNpilot_cont_500_bf_scaffold_11865_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3348..4322
DNA (975bp) protein (325aa)
Probable DNA repair protein NB311A_02819 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS34_9BRAD rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_11865_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4335..4523
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS35_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37206.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_11865_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4588..5460
DNA (873bp) protein (291aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module {ECO:0000313|EMBL:ABA03620.1}; EC=6.5.1.1 {ECO:0000313|EMBL:ABA03620.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS36_9BRAD
SCNpilot_cont_500_bf_scaffold_11865_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5405..7264
DNA (1860bp) protein (620aa)
DNA ligase {ECO:0000313|EMBL:EAQ37207.1}; EC=6.5.1.1 {ECO:0000313|EMBL:EAQ37207.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS36_9BRAD
SCNpilot_cont_500_bf_scaffold_11865_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7631..8173
DNA (543bp) protein (181aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Arginase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS27_9BRAD
SCNpilot_cont_500_bf_scaffold_11865_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8200..9858)
DNA (1659bp) protein (553aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000255|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000255|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000255|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000255|HAMAP-Rule:MF_00453};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PCKA_NITHX
SCNpilot_cont_500_bf_scaffold_11865_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10161..10904)
DNA (744bp) protein (248aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR13_NITHX rbh
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07226 hypothetical protein rbh
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein {ECO:0000313|EMBL:ABE61334.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_11865_10
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11121..11393
DNA (273bp) protein (91aa)
Two-component transcriptional regulatory protein ChvI n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TCM8_9BRAD
chvI; two-component transcriptional regulator ChvI; K14981 two-component system, OmpR family, response regulator ChvI
Two-component transcriptional regulatory protein ChvI {ECO:0000313|EMBL:CCD86108.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Displaying 10 items

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