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SCNpilot_cont_500_bf_scaffold_1196

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1196_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Methyltransferase type 11 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP16_NITHX
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ABE62031.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1196_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273..893
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP15_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62032.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1196_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1124..1870
DNA (747bp) protein (249aa)
Acylneuraminate cytidylyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QP14_NITHX rbh
acylneuraminate cytidylyltransferase rbh
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ABE62033.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1196_4
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2239..3462
DNA (1224bp) protein (408aa)
secretion protein HylD n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A514B
Uncharacterized protein {ECO:0000313|EMBL:KJC53862.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
putative Multidrug resistance protein HlyD family; K03543 multidrug resistance protein A
SCNpilot_cont_500_bf_scaffold_1196_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3469..5055
DNA (1587bp) protein (529aa)
DSBA oxidoreductase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349C1E3
DSBA oxidoreductase {ECO:0000313|EMBL:KJC50432.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_cont_500_bf_scaffold_1196_6
bacterium YEK0313, Bacteria

Not on your lists

comp(5244..6200)
DNA (957bp) protein (319aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QP21_9BRAD
GDP-L-fucose synthase {ECO:0000313|EMBL:CEJ14711.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_500_bf_scaffold_1196_7
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7573..8619
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXK5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC58423.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1196_8
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8591..9895
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXK4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC58422.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1196_9
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9906..10787
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDE53
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_cont_500_bf_scaffold_1196_10
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10874..11179)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTD4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV44216.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1196_11
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11212..12294)
DNA (1083bp) protein (361aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C3Q1_HYPNA
endonuclease/exonuclease/phosphatase family protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_1196_12
unknown

Not on your lists

12358..12753
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1196_13
bacterium YEK0313, Bacteria

Not on your lists

13183..13689
DNA (507bp) protein (169aa)
RNA polymerase sigma factor n=1 Tax=Rhizobium radiobacter RepID=UPI000370ECC6
Putative RNA polymerase sigma factor FecI {ECO:0000313|EMBL:CEJ14980.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
RNA polymerase sigma factor protein
SCNpilot_cont_500_bf_scaffold_1196_14
bacterium YEK0313, Bacteria

Not on your lists

13782..14735
DNA (954bp) protein (318aa)
FecR iron sensor protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JNI9_AGRRK rbh
Fec operon regulator FecR {ECO:0000313|EMBL:CEJ14979.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
FecR iron sensor protein; K07165 transmembrane sensor rbh
SCNpilot_cont_500_bf_scaffold_1196_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..17373
DNA (2412bp) protein (804aa)
Probable tonB-dependent receptor protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV81_9BRAD rbh
Probable tonB-dependent receptor protein {ECO:0000313|EMBL:EAQ36109.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
femA; ferric-mycobactin receptor, FemA; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_500_bf_scaffold_1196_16
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17388..17669
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3I4F5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK42940.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
putative iron uptake protein
SCNpilot_cont_500_bf_scaffold_1196_17
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17666..19267
DNA (1602bp) protein (534aa)
Uncharacterized iron-regulated membrane protein DUF337 n=1 Tax=Cellvibrio sp. BR RepID=I3I4F6_9GAMM rbh
Uncharacterized iron-regulated membrane protein DUF337 {ECO:0000313|EMBL:EIK42941.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
iron-regulated membrane protein rbh
SCNpilot_cont_500_bf_scaffold_1196_18
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19264..19698
DNA (435bp) protein (145aa)
Membrane protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZX38_9RHOO
Membrane protein {ECO:0000313|EMBL:ENO99037.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
membrane protein
SCNpilot_cont_500_bf_scaffold_1196_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19695..20858
DNA (1164bp) protein (388aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ABC transporter, ATPase subunit n=2 Tax=Nitrobacter sp. Nb-311A RepID=A3X069_9BRAD
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB rbh
SCNpilot_cont_500_bf_scaffold_1196_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20865..21347
DNA (483bp) protein (161aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSV5_9BRAD
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EAQ36899.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_500_bf_scaffold_1196_21
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21344..22141
DNA (798bp) protein (266aa)
TonB like protein n=2 Tax=Nitrobacter sp. Nb-311A RepID=A3WSV4_9BRAD rbh
TonB like protein {ECO:0000313|EMBL:EAQ36898.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
TonB-like protein rbh
SCNpilot_cont_500_bf_scaffold_1196_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22294..22785
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZH0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34620.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1196_23
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22946..23827
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=2 Tax=Alcaligenes RepID=M5IU80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ERI33157.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1196_24
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23789..24052)
DNA (264bp) protein (88aa)
conjugal transfer protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B42D9E
(Protein belongs to CMGI-3) {ECO:0000313|EMBL:KJS06157.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
conjugal transfer protein
SCNpilot_cont_500_bf_scaffold_1196_25
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24330..25241)
DNA (912bp) protein (304aa)
conjugative transfer protein TrbI n=1 Tax=Spongiibacter tropicus RepID=UPI0003B62891
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:AEF22092.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
SCNpilot_cont_500_bf_scaffold_1196_26
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25238..26230)
DNA (993bp) protein (331aa)
conjugative transfer protein TrbG n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003104D72
Conjugative transfer protein TrbG {ECO:0000313|EMBL:ETM67776.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
trbG; Conjugative transfer protein TrbG
SCNpilot_cont_500_bf_scaffold_1196_27
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26246..26941)
DNA (696bp) protein (232aa)
conjugal transfer protein TrbF n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B42FBA
conjugal transfer protein TrbF
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_cont_500_bf_scaffold_1196_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26945..28288)
DNA (1344bp) protein (448aa)
conjugal transfer protein TrbL n=1 Tax=Variovorax paradoxus RepID=UPI0003738F12
Conjugal transfer protein TrbL {ECO:0000313|EMBL:GAO21469.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
trbL; Conjugative transfer protein TrbL; K07344 type IV secretion system protein TrbL
SCNpilot_cont_500_bf_scaffold_1196_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28288..28620)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTE6_STRMK
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_cont_500_bf_scaffold_1196_30
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28632..29369)
DNA (738bp) protein (246aa)
Conjugal transfer TrbJ signal peptide protein TrbJ n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GX41_CUPNN
trbJ; conjugal transfer TrbJ signal peptide protein TrbJ
Conjugal transfer TrbJ signal peptide protein TrbJ {ECO:0000313|EMBL:AEI81911.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Displaying items 1-30 of 40 in total

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