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SCNpilot_cont_500_bf_scaffold_1288

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1288_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(101..1249)
DNA (1149bp) protein (383aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNR7_NITHX
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABE62130.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1288_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1266..2231)
DNA (966bp) protein (322aa)
Oxidoreductase-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNR8_NITHX
oxidoreductase-like
Oxidoreductase-like protein {ECO:0000313|EMBL:ABE62129.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1288_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2611..4023)
DNA (1413bp) protein (471aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] rbh
Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:ABE62128.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ABE62128.1};; EC=5.3.1.8 {ECO:0000313|EMBL:ABE62128.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNR9_NITHX rbh
SCNpilot_cont_500_bf_scaffold_1288_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4215..5225)
DNA (1011bp) protein (337aa)
NAD-dependent epimerase/dehydratase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] rbh
NAD-dependent epimerase/dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS0_NITHX rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABE62127.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1288_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..6409
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS1_NITHX rbh
hypothetical protein; K07027 rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62126.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1288_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6442..8349)
DNA (1908bp) protein (636aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS2_NITHX rbh
polysaccharide biosynthesis protein CapD; K13013 O-antigen biosynthesis protein WbqV rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ABE62125.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1288_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8426..9895)
DNA (1470bp) protein (490aa)
bifunctional ADP-heptose synthase; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] rbh
Bifunctional protein HldE {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.1.167 {ECO:0000255|HAMAP-Rule:MF_01603};; D-beta-D-heptose 7-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_01603}; D-glycero-beta-D-manno-heptose-7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.7.70 {ECO:0000255|HAMAP-Rule:MF_01603};; D-glycero-beta-D-ma
Bifunctional protein HldE n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=HLDE_NITHX rbh
SCNpilot_cont_500_bf_scaffold_1288_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10106..11086)
DNA (981bp) protein (327aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS4_NITHX
SCNpilot_cont_500_bf_scaffold_1288_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11421..12488
DNA (1068bp) protein (356aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-]
Lipopolysaccharide heptosyltransferase II n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVC7_9BRAD
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EAQ36062.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_1288_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12626..13213
DNA (588bp) protein (196aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphoheptose isomerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS6_NITHX
SCNpilot_cont_500_bf_scaffold_1288_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13210..13761
DNA (552bp) protein (184aa)
HAD family hydrolase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] rbh
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS7_NITHX rbh
SCNpilot_cont_500_bf_scaffold_1288_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13945..14889)
DNA (945bp) protein (315aa)
lipopolysaccharide heptosyltransferase I; K02841 heptosyltransferase I [EC:2.4.-.-]
Lipopolysaccharide heptosyltransferase I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNS8_NITHX
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:ABE62119.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1288_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15079..16089
DNA (1011bp) protein (337aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVD1_9BRAD
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EAQ36058.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_1288_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16211..18013
DNA (1803bp) protein (601aa)
ABC transporter, transmembrane region {ECO:0000313|EMBL:ABA04326.1}; EC=3.6.3.27 {ECO:0000313|EMBL:ABA04326.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
ABC transporter transmembrane region (EC:3.6.3.27); K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter, transmembrane region n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3STR5_NITWN rbh
SCNpilot_cont_500_bf_scaffold_1288_15
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18083..18787
DNA (705bp) protein (235aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVD6_9BRAD
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EAQ36056.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_1288_16
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18827..21424)
DNA (2598bp) protein (866aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVD5_9BRAD
SCNpilot_cont_500_bf_scaffold_1288_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21430..23115)
DNA (1686bp) protein (562aa)
DNA repair protein RecN n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNT3_NITHX
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 17 items

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