name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_1871_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..124)
|
Formate/nitrite transporter n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW31_9BRAD
Formate/nitrite transporter {ECO:0000313|EMBL:EAQ35807.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
formate/nitrite transporter
|
|
SCNpilot_cont_500_bf_scaffold_1871_2
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(443..979)
|
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
ppa; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000361AA9B
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1871_3
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1021..1566)
|
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CAU5_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24228.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_4
unknown
|
Not on your lists |
comp(1734..1829)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1871_5
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1826..3457)
|
Putative DNA mismatch repair protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CAU6_METED
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68120.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
DNA mismatch repair protein
|
|
SCNpilot_cont_500_bf_scaffold_1871_6
unknown
|
Not on your lists |
comp(3460..3600)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1871_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3597..4046)
|
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDO60865.1}; EC=2.1.1.79 {ECO:0000313|EMBL:CDO60865.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
cfa; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003660B6B
|
|
SCNpilot_cont_500_bf_scaffold_1871_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4065..6200)
|
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
Enolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFB7_9SPHN
rbh
enolase
|
|
SCNpilot_cont_500_bf_scaffold_1871_9
unknown
|
Not on your lists |
comp(6463..7194)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1871_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7161..7487)
|
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003656D66
Uncharacterized protein {ECO:0000313|EMBL:KDM67693.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein; K09137 hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1871_11
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7498..7872)
|
Putative fluoride ion transporter CrcB n=3 Tax=Acidiphilium RepID=A5FV99_ACICJ
CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_12
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7956..9935)
|
Putative NADH dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4H7_ACIMA
rbh
putative NADH dehydrogenase
rbh
Putative NADH dehydrogenase {ECO:0000313|EMBL:BAJ80029.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_13
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9925..10713)
|
NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR1_9BURK
rbh
NADH ubiquinone oxidoreductase, 20 kDa subunit {ECO:0000313|EMBL:EGD06341.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
putative NADH ubiquinone oxidoreductase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1871_14
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10722..12185)
|
Putative NADH-ubiquinone oxidoreductase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4H5_ACIMA
rbh
putative NADH-ubiquinone oxidoreductase
rbh
Putative NADH-ubiquinone oxidoreductase {ECO:0000313|EMBL:BAJ80027.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_15
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12182..13666)
|
NADH dehydrogenase (Quinone) n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR3_9BURK
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:EGD06343.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_16
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13668..14348)
|
hypothetical protein; K12140 hydrogenase-4 component E [EC:1.-.-.-]
Hydrogenase 4 membrane component (E) n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR4_9BURK
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:EGD06344.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_17
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14353..15300)
|
Formate hydrogenlyase subunit 4-like protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0FWR5_9BURK
Formate hydrogenlyase subunit 4-like protein {ECO:0000313|EMBL:EGD06345.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1871_18
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15518..15937)
|
HIT family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FN65_9RHOB
HIT family protein {ECO:0000313|EMBL:EDM72551.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
HIT family protein
|
|
SCNpilot_cont_500_bf_scaffold_1871_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16412..19396)
|
Ribonucleotide-diphosphate reductase alpha subunit {ECO:0000313|EMBL:EAQ35563.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EAQ35563.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleotide-diphosphate reductase alpha subunit n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWS6_9BRAD
|
|
SCNpilot_cont_500_bf_scaffold_1871_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20897..21256)
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLL8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62879.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21569..24631)
|
UvrABC system protein A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLL9_NITHX
rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1871_22
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25308..26078)
|
Putative outer-membrane protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWS4_9BRAD
rbh
Putative outer-membrane protein {ECO:0000313|EMBL:EAQ35566.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
outer-membrane protein precursor
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1871_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26430..26921
|
Single-stranded DNA-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLM1_NITHX
rbh
single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_24
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27057..27509
|
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4N0_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89893.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_25
unknown
|
Not on your lists |
27817..28077
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1871_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28078..29343)
|
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:ABE61655.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABE61655.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ42_NITHX
|
|
SCNpilot_cont_500_bf_scaffold_1871_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29573..30478)
|
Transcriptional regulator, LysR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS59_NITHX
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE60938.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_cont_500_bf_scaffold_1871_28
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30756..31235
|
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Catalase-peroxidase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS41_9BRAD
|