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SCNpilot_cont_500_bf_scaffold_8269

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8269_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..864)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY80_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ35064.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8269_2
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1169..2164
DNA (996bp) protein (332aa)
Periplasmic protein-like protein n=2 Tax=Ralstonia pickettii RepID=C6BPL3_RALP1
Uncharacterized protein {ECO:0000313|EMBL:GAN50953.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
periplasmic protein-like protein
SCNpilot_cont_500_bf_scaffold_8269_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2225..2425)
DNA (201bp) protein (67aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Phosphomethylpyrimidine synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNF0_AFIFE
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
SCNpilot_cont_500_bf_scaffold_8269_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2422..4065)
DNA (1644bp) protein (548aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Phosphomethylpyrimidine synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY78_9BRAD
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
SCNpilot_cont_500_bf_scaffold_8269_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4091..4477)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJD4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63663.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_8269_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4487..5095)
DNA (609bp) protein (203aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter s
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY76_9BRAD
SCNpilot_cont_500_bf_scaffold_8269_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5082..5864)
DNA (783bp) protein (261aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Thiazole synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY75_9BRAD rbh
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG rbh
SCNpilot_cont_500_bf_scaffold_8269_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6038..6235)
DNA (198bp) protein (66aa)
ThiS, thiamine-biosynthesis n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY85_9BRAD
ThiS, thiamine-biosynthesis {ECO:0000313|EMBL:EAQ35058.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
sulfur carrier protein ThiS; K03154 sulfur carrier protein
SCNpilot_cont_500_bf_scaffold_8269_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6240..7271)
DNA (1032bp) protein (344aa)
glycine oxidase ThiO; K03153 glycine oxidase [EC:1.4.3.19]
Glycine oxidase {ECO:0000313|EMBL:ABE63659.1}; EC=1.4.3.19 {ECO:0000313|EMBL:ABE63659.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glycine oxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJD8_NITHX
SCNpilot_cont_500_bf_scaffold_8269_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..8933
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY83_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ35056.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_8269_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8955..9428)
DNA (474bp) protein (158aa)
Lytic transglycosylase, catalytic n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJD9_NITHX
lytic transglycosylase, catalytic
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABE63658.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 11 items

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