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SCNpilot_cont_500_bf_scaffold_3521

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3521_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..521)
DNA (519bp) protein (173aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRG7_9BRAD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
phosphate uptake regulator PhoU; K02039 phosphate transport system protein
SCNpilot_cont_500_bf_scaffold_3521_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..1374)
DNA (822bp) protein (274aa)
pstB; phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate import ATP-binding protein PstB {ECO:0000255|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000255|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000255|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000255|HAMAP-Rule:MF_01702}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphate import ATP-binding protein PstB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PSTB_NITHX
SCNpilot_cont_500_bf_scaffold_3521_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1371..2216)
DNA (846bp) protein (282aa)
Phosphate ABC transporter membrane protein 2, PhoT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH2_NITHX rbh
phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
Phosphate ABC transporter membrane protein 2, PhoT family {ECO:0000313|EMBL:ABE61525.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2293..3324)
DNA (1032bp) protein (344aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVB7_NITWN rbh
phosphate ABC transporter permease PstC; K02037 phosphate transport system permease protein rbh
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:ABA03774.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_3521_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3410..4321)
DNA (912bp) protein (304aa)
Phosphate-binding protein PstS n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVB8_NITWN rbh
periplasmic phosphate binding protein; K02040 phosphate transport system substrate-binding protein rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_3521_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4452..5741)
DNA (1290bp) protein (430aa)
histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH5_NITHX
SCNpilot_cont_500_bf_scaffold_3521_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5779..6834)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH6_NITHX
hypothetical protein; K07027
Uncharacterized protein {ECO:0000313|EMBL:ABE61521.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7088..7402)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61520.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7407..8798)
DNA (1392bp) protein (464aa)
OmpA/MotB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH8_NITHX
OmpA/MotB
OmpA/MotB {ECO:0000313|EMBL:ABE61519.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9069..10127
DNA (1059bp) protein (353aa)
Polysaccharide deacetylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH9_NITHX
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE61518.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10187..11941)
DNA (1755bp) protein (585aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI1_NITHX
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABE61516.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12157..12483
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61515.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12548..13219)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI3_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61514.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_14
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13358..13543)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RL32_NITWN
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_3521_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13668..14303)
DNA (636bp) protein (212aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] rbh
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000255|HAMAP-Rule:MF_00766}; Short=Monofunctional TGase {ECO:0000255|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_00766};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MTGA_NITHX rbh
SCNpilot_cont_500_bf_scaffold_3521_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14649..15575
DNA (927bp) protein (309aa)
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ABE61511.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ABE61511.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Farnesyl-diphosphate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI6_NITHX rbh
SCNpilot_cont_500_bf_scaffold_3521_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15584..16276
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI7_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61510.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_18
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16292..18142)
DNA (1851bp) protein (617aa)
Preprotein translocase subunit SecG n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDL5_9BRAD rbh
Caspase (Peptidase) {ECO:0000313|EMBL:KJC51645.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3521_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18453..19961
DNA (1509bp) protein (503aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI8_NITHX
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABE61509.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3521_20
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19992..21284)
DNA (1293bp) protein (431aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000255|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000255|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00159}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=ISPG_NITWN rbh
Displaying 20 items

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