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SCNpilot_cont_500_bf_scaffold_3748

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3748_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(76..570)
DNA (495bp) protein (165aa)
UspA n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMU3_NITWN rbh
hypothetical protein rbh
UspA {ECO:0000313|EMBL:ABA03276.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_3748_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..1872)
DNA (909bp) protein (303aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Tryptophan--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS83_NITHX
SCNpilot_cont_500_bf_scaffold_3748_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2038..3591)
DNA (1554bp) protein (518aa)
Integral membrane protein MviN n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS84_NITHX
integral membrane protein MviN; K03980 virulence factor
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4169..4786
DNA (618bp) protein (206aa)
PfkB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS85_NITHX
PfkB protein
PfkB {ECO:0000313|EMBL:ABE60912.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4796..5533)
DNA (738bp) protein (246aa)
Pirin n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT25_9BRAD
Pirin {ECO:0000313|EMBL:EAQ37189.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Pirin-like protein; K06911
SCNpilot_cont_500_bf_scaffold_3748_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..6133
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WT24_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37190.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3748_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6088..6729)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS89_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60908.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7028..7498
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS90_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60907.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..8027
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS90_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60907.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8213..10654)
DNA (2442bp) protein (814aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
DNA gyrase subunit B n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS91_NITHX rbh
SCNpilot_cont_500_bf_scaffold_3748_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10921..12066)
DNA (1146bp) protein (382aa)
DNA replication and repair protein RecF n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS92_NITHX
recF; recombination protein F; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12063..14192)
DNA (2130bp) protein (710aa)
glycosyl transferase family 2 n=1 Tax=Afipia birgiae RepID=UPI00036BD466
Putative glycosyl transferase {ECO:0000313|EMBL:EGP09120.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
glycosyl transferase family protein
SCNpilot_cont_500_bf_scaffold_3748_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..15213
DNA (888bp) protein (296aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP5_NITHX
extracellular solute-binding protein
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:ABE61102.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15338..17053
DNA (1716bp) protein (572aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Lysine--tRNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSK1_9BRAD
SCNpilot_cont_500_bf_scaffold_3748_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17361..17879
DNA (519bp) protein (173aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP7_NITHX rbh
ErfK/YbiS/YcfS/YnhG rbh
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABE61100.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17928..18215)
DNA (288bp) protein (96aa)
Nuclease (SNase-like protein) n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWB9_NITWN
nuclease
Nuclease (SNase-like protein) {ECO:0000313|EMBL:ABA03422.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_3748_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18513..18743)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61099.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_18
unknown

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comp(18960..19178)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3748_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19223..20221
DNA (999bp) protein (333aa)
hypothetical protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Fmu (Sun) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP9_NITHX
Fmu (Sun) {ECO:0000313|EMBL:ABE61098.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_3748_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20359..22113
DNA (1755bp) protein (585aa)
Heparinase II/III-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ0_NITHX
Heparinase II/III-like protein {ECO:0000313|EMBL:ABE61097.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
heparinase II/III-like
SCNpilot_cont_500_bf_scaffold_3748_21
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22279..23817
DNA (1539bp) protein (513aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
Bifunctional purine biosynthesis protein PurH n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSJ5_9BRAD rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Displaying 21 items

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