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SCNpilot_cont_500_bf_scaffold_2075_24

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(21381..22241)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 252.0
  • Bit_score: 476
  • Evalue 7.10e-132
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 252.0
  • Bit_score: 476
  • Evalue 3.20e-131
Transcription-repair-coupling factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP6_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 252.0
  • Bit_score: 476
  • Evalue 2.30e-131

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
CAGGCCCTGTCGGTCGCGCCGGGCCACGTGGTGCCGATGGACTCGATCGTCGCATGGCTGGAGCACAACGGCTACAACCGCTCCTCGACGGTTCGCGAGCCCGGCGAATACGCCGTGCGTGGCGGCATCCTCGATCTGTTTCCGTCCAGTCTCGACCAGCCCGTCCGGTTCGATTTCTTCGGCGACTCCCTGGAGTCGATCCGCTCGTTCGACGCTGAAACCCAGCGCACGCTGCTCGATGTGCGTTCGCTCGATTTGGTCCCGATTTCAGAATTCCAGTTCGTCACCGAAACCATCCGGCGCTTCCGGATGGGATATGTGGCCGCGTTCGGGGCGCCCGCACCGGACGACCTGCTGTACGAGGCCGTCAGCGAGGGACGGCGGTATCCCGGCATGGAGCACTGGCTGCCGTTGTTTCACGAACGCATGGACACGCTATTCGATTATCTCGATGGCGCGACCATCGCCGTTGAGCCGCAGGGCGAGGACGCAGCGAACGAGCGTTTCAAGCAGATCGCGGACTACTACGAGGCGCGGCGCGAGGCCGTCGAGCATTCCGGCGGCGGTGCGATCTACAAGCCGCTTCCGCCCGACCGGCTTTATCTGACGCCGGACGAATGGACGAAGCGCATCAGTGAAAACGTGCTGGTGCGGCTGACGCCTTTTGCGGTGCCCGACGAGGCCGTCGATGTCATCGATGCCGGCGCGCGGCAGGGGCGGAATTTCGCGCCCGAGCGGGCGGACGCCACTGTGGAGCGAGGGTTCGCGCGATCGCATGGCGAGCATGCTGCGGGACCACAAGCTGCTCAACCTGACGAGCGTCAATGTGTGGCGCACGGTTCAGGCCACGCCGCGCAATGA
PROTEIN sequence
Length: 287
QALSVAPGHVVPMDSIVAWLEHNGYNRSSTVREPGEYAVRGGILDLFPSSLDQPVRFDFFGDSLESIRSFDAETQRTLLDVRSLDLVPISEFQFVTETIRRFRMGYVAAFGAPAPDDLLYEAVSEGRRYPGMEHWLPLFHERMDTLFDYLDGATIAVEPQGEDAANERFKQIADYYEARREAVEHSGGGAIYKPLPPDRLYLTPDEWTKRISENVLVRLTPFAVPDEAVDVIDAGARQGRNFAPERADATVERGFARSHGEHAAGPQAAQPDERQCVAHGSGHAAQ*