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SCNpilot_cont_500_bf_scaffold_2075

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2075_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..350)
DNA (348bp) protein (116aa)
carboxyl transferase (EC:6.4.1.3); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
Carboxyl transferase {ECO:0000313|EMBL:ABA04866.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABA04866.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Carboxyl transferase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SS75_NITWN
SCNpilot_cont_500_bf_scaffold_2075_2
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(620..805)
DNA (186bp) protein (62aa)
ETC complex I subunit conserved region n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SS74_NITWN
ETC complex I subunit region
ETC complex I subunit conserved region {ECO:0000313|EMBL:ABA04867.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2075_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1369..1629)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0E6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34288.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2075_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2187..2495)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLG6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62931.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_5
unknown

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2938..3273
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003632E10
SCNpilot_cont_500_bf_scaffold_2075_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3549..3677
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1L8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33873.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_2075_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4011..4475
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLR1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62836.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4671..5459
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1L4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ33875.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2075_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..5937)
DNA (411bp) protein (137aa)
Cupin region protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ36_9BRAD
Cupin region protein {ECO:0000313|EMBL:EAQ34757.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
cupin
SCNpilot_cont_500_bf_scaffold_2075_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6113..6844
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ9_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62838.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6841..7851
DNA (1011bp) protein (337aa)
Allophanate hydrolase subunit 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ8_NITHX
allophanate hydrolase subunit 2
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:ABE62839.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7911..8678
DNA (768bp) protein (256aa)
UPF0271 protein Nham_2042 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y2042_NITHX rbh
LamB/YcsF family protein; K07160 UPF0271 protein rbh
UPF0271 protein Nham_2042 {ECO:0000255|HAMAP-Rule:MF_00691}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8689..8841)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ25_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34761.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_500_bf_scaffold_2075_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9011..9988)
DNA (978bp) protein (326aa)
zinc-binding alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ5_NITHX
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABE62842.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10068..10793)
DNA (726bp) protein (242aa)
Integral membrane protein TerC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ4_NITHX rbh
integral membrane protein TerC rbh
Integral membrane protein TerC {ECO:0000313|EMBL:ABE62843.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10790..11524)
DNA (735bp) protein (245aa)
phosphatidylcholine synthase (EC:2.7.8.24); K01004 phosphatidylcholine synthase [EC:2.7.8.24] rbh
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Phosphatidylcholine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ3_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2075_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11620..12897
DNA (1278bp) protein (426aa)
2-octaprenyl-6-methoxyphenyl hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ABE62845.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABE62845.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ2_NITHX rbh
SCNpilot_cont_500_bf_scaffold_2075_18
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13020..13352
DNA (333bp) protein (111aa)
Hemimethylated DNA-binding region n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSH2_NITWN
hemimethylated DNA-binding region; K11940 heat shock protein HspQ
Hemimethylated DNA-binding region {ECO:0000313|EMBL:ABA04769.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_2075_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13629..14423)
DNA (795bp) protein (265aa)
Invasion associated locus B n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLQ0_NITHX
invasion associated locus B
Invasion associated locus B {ECO:0000313|EMBL:ABE62847.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14680..16887
DNA (2208bp) protein (736aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP9_NITHX
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABE62848.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_2075_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16847..17881
DNA (1035bp) protein (345aa)
AMP-dependent synthetase and ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP8_NITHX
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABE62849.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17967..19202
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP7_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE62850.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2075_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19208..21415)
DNA (2208bp) protein (736aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP6_NITHX
SCNpilot_cont_500_bf_scaffold_2075_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21381..22241)
DNA (861bp) protein (287aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Transcription-repair-coupling factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP6_NITHX
Displaying 24 items

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