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SCNpilot_cont_500_bf_scaffold_2231

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2231_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2231_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(798..1562)
DNA (765bp) protein (255aa)
Rhomboid family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5W4_9CHLR
Peptidase S54 {ECO:0000313|EMBL:EWM18887.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
rhomboid family protein
SCNpilot_cont_500_bf_scaffold_2231_3
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1613..2272
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C569_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ82209.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_500_bf_scaffold_2231_4
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2314..2565
DNA (252bp) protein (84aa)
antitoxin n=1 Tax=Humibacter albus RepID=UPI0003B3B182
Uncharacterized protein {ECO:0000313|EMBL:EQM73180.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
prevent-host-death family protein
SCNpilot_cont_500_bf_scaffold_2231_5
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2562..2822
DNA (261bp) protein (87aa)
toxin-antitoxin system, toxin component, Txe/YoeB family n=1 Tax=Humibacter albus RepID=UPI0003B4BA92
Uncharacterized protein {ECO:0000313|EMBL:KFF59049.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2231_6
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2845..3726)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI000377368E
Hydrolase {ECO:0000313|EMBL:KDE98777.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
hydrolase, CocE/NonD family protein
SCNpilot_cont_500_bf_scaffold_2231_7
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3756..4445)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI000377368E
acyl esterase; K06978
Acyl esterase {ECO:0000313|EMBL:ACC39727.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
SCNpilot_cont_500_bf_scaffold_2231_8
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4487..4789)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D7A3B4
Uncharacterized protein {ECO:0000313|EMBL:KJL19168.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
SCNpilot_cont_500_bf_scaffold_2231_9
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4930..5142)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ72739.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
SCNpilot_cont_500_bf_scaffold_2231_10
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5132..6016)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00036D604A
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ64651.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
phosphoribosyltransferase
SCNpilot_cont_500_bf_scaffold_2231_11
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6194..6646)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000367D81A
Uncharacterized protein {ECO:0000313|EMBL:ERG63690.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2231_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7151..7909
DNA (759bp) protein (253aa)
DeoR faimly transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003793489 rbh
Regulatory protein DeoR {ECO:0000313|EMBL:EIC07881.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator of sugar metabolism rbh
SCNpilot_cont_500_bf_scaffold_2231_13
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9430..9651
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000363099E
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93696.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
sulfite oxidase
SCNpilot_cont_500_bf_scaffold_2231_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9681..10271)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F29EC
TetR family transcriptional regulator {ECO:0000313|EMBL:KHK95230.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2231_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10376..11395
DNA (1020bp) protein (340aa)
aldo/keto reductase n=1 Tax=Humibacter albus RepID=UPI0003B70DDB
Aldo/keto reductase {ECO:0000313|EMBL:KHK95231.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
aldo/keto reductase rbh
SCNpilot_cont_500_bf_scaffold_2231_16
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11424..12833)
DNA (1410bp) protein (470aa)
membrane protein n=1 Tax=Humibacter albus RepID=UPI0003B67A1F
Membrane protein {ECO:0000313|EMBL:KHK98287.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2231_17
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12830..13915)
DNA (1086bp) protein (362aa)
epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
Putative epimerase/dehydratase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHL7_CLAMS rbh
Putative epimerase/dehydratase {ECO:0000313|EMBL:CAQ02578.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCNpilot_cont_500_bf_scaffold_2231_18
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13912..14757)
DNA (846bp) protein (282aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
nucleoside phosphorylase (EC:2.4.2.-)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003814516
SCNpilot_cont_500_bf_scaffold_2231_19
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14886..15476
DNA (591bp) protein (197aa)
Membrane-bound oxidoreductase,molybdopterin-binding n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BDR2_9MICO
membrane-bound oxidoreductase,molybdopterin-binding
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_500_bf_scaffold_2231_20
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15476..16090
DNA (615bp) protein (205aa)
Membrane-bound oxidoreductase,molybdopterin-binding n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BDR2_9MICO
Molybdopterin-binding protein {ECO:0000313|EMBL:KJC64404.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
membrane-bound oxidoreductase,molybdopterin-binding
SCNpilot_cont_500_bf_scaffold_2231_21
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16087..16542
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035CF8FD
Uncharacterized protein {ECO:0000313|EMBL:EYT65504.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2231_22
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16527..17273)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003613AD8
Uncharacterized protein {ECO:0000313|EMBL:KHK98284.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
methyltransferase
SCNpilot_cont_500_bf_scaffold_2231_23
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17270..17926)
DNA (657bp) protein (219aa)
glycosyltransferase n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003771C12
Uncharacterized protein {ECO:0000313|EMBL:EST24917.1}; Flags: Fragment;; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein; K09931 hypothetical protein
SCNpilot_cont_500_bf_scaffold_2231_24
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17923..18582)
DNA (660bp) protein (220aa)
Putative glycosyltransferase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CTI2_CLAM3
Glycosyltransferase {ECO:0000313|EMBL:KHK98283.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative glycosyltransferase
SCNpilot_cont_500_bf_scaffold_2231_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18695..19438
DNA (744bp) protein (248aa)
PhoB family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B2E59F
Uncharacterized protein {ECO:0000313|EMBL:KHK98288.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
two component transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2231_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19435..20583
DNA (1149bp) protein (383aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
histidine kinase n=1 Tax=Humibacter albus RepID=UPI0003B47AE2 rbh
putative two-component system sensor kinase
SCNpilot_cont_500_bf_scaffold_2231_27
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20778..22115
DNA (1338bp) protein (446aa)
Putative secreted serine protease, family S1C (EC:3.4.21.-)
septum formation initiator n=1 Tax=Humibacter albus RepID=UPI0003B78E61 rbh
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:KHS50820.1}; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
SCNpilot_cont_500_bf_scaffold_2231_28
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22356..22538)
DNA (183bp) protein (61aa)
MutT-like domain protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AFC5_LEIXX
MutT-like domain-containing protein
MutT-like domain protein {ECO:0000313|EMBL:AAT88920.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
SCNpilot_cont_500_bf_scaffold_2231_29
unknown

Not on your lists

22686..22883
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2231_30
unknown

Not on your lists

22995..23315
DNA (321bp) protein (107aa)

This feature has no annotations

Displaying 30 items

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