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SCNpilot_cont_500_bf_scaffold_684

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_684_1
unknown

Not on your lists

comp(318..539)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_684_2
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1004..2590
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C6A32 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPH69156.1}; TaxID=1260365 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 02-MB-P-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_684_3
unknown

Not on your lists

comp(2871..3881)
DNA (1011bp) protein (337aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_684_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4251..4430)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DDA486
Uncharacterized protein {ECO:0000313|EMBL:CDK00540.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_500_bf_scaffold_684_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4550..5194
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035EAD1D rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00539.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_500_bf_scaffold_684_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5686..6057
DNA (372bp) protein (124aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NG32_MICTS
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ75295.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_684_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6156..6995)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB70_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86368.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NERD domain protein
SCNpilot_cont_500_bf_scaffold_684_8
unknown

Not on your lists

7197..7706
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V645_MYCFO
SCNpilot_cont_500_bf_scaffold_684_9
unknown

Not on your lists

7944..8255
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_684_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8367..9230
DNA (864bp) protein (288aa)
Alpha/beta hydrolase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VYP4_9ACTO
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AGZ41907.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_500_bf_scaffold_684_11
unknown

Not on your lists

comp(9371..9811)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_684_12
unknown

Not on your lists

comp(10676..10927)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_684_13
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10981..11919
DNA (939bp) protein (313aa)
ABC transporter permease n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B648DB rbh
ABC transporter permease {ECO:0000313|EMBL:KJC63843.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_684_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11886..12620)
DNA (735bp) protein (245aa)
PREDICTED: X-linked retinitis pigmentosa GTPase regulator n=1 Tax=Spermophilus tridecemlineatus RepID=UPI00038C4BE2
Uncharacterised protein {ECO:0000313|EMBL:CRH71797.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
SCNpilot_cont_500_bf_scaffold_684_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13644..13928)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TED8_9BURK
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_cont_500_bf_scaffold_684_16
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14145..14393
DNA (249bp) protein (83aa)
ABC transporter n=1 Tax=Agromyces subbeticus RepID=UPI0003B6B909
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KFZ79780.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
dipeptide/oligopeptide/nickel ABC transporter ATPase
SCNpilot_cont_500_bf_scaffold_684_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14390..15121
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S4C7_GEOOG
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB75117.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_500_bf_scaffold_684_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15178..15846
DNA (669bp) protein (223aa)
demethylmenaquinone methyltransferase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3348E
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:AJP72738.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
dimethylmenaquinone methyltransferase
SCNpilot_cont_500_bf_scaffold_684_19
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

15896..17011
DNA (1116bp) protein (372aa)
Glycoside hydrolase family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW63_9EURY
glycoside hydrolase family protein
Tax=RBG_13_Planctomycetes_50_24_curated
SCNpilot_cont_500_bf_scaffold_684_20
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17008..18030
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003151309 rbh
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:ELQ91749.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
putative L-threonine dehydrogenase
SCNpilot_cont_500_bf_scaffold_684_21

Not on your lists

18032..18901
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000369F670
Uncharacterized protein {ECO:0000313|EMBL:KGA17804.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
SMP-30/Gluconolaconase/LRE domain protein
SCNpilot_cont_500_bf_scaffold_684_22
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19001..19759
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B78557
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGT30803.1}; TaxID=1345697 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
SCNpilot_cont_500_bf_scaffold_684_23
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19768..20973)
DNA (1206bp) protein (402aa)
altronate dehydratase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate dehydratase {ECO:0000313|EMBL:ADG10305.1}; EC=4.2.1.7 {ECO:0000313|EMBL:ADG10305.1};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Altronate dehydratase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGI6_CAUST
SCNpilot_cont_500_bf_scaffold_684_24
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20980..21318)
DNA (339bp) protein (113aa)
UxaA family hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Hydrolase, UxaA family {ECO:0000313|EMBL:ACE84432.1}; EC=4.2.1.7 {ECO:0000313|EMBL:ACE84432.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
Hydrolase, UxaA family n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PBS2_CELJU
SCNpilot_cont_500_bf_scaffold_684_25
unknown

Not on your lists

21567..22301
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_684_26
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22345..22929
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003476376
Uncharacterized protein {ECO:0000313|EMBL:KJL20434.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCNpilot_cont_500_bf_scaffold_684_27
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23009..23767
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036B35F0
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABZ71996.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_500_bf_scaffold_684_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23761..24234
DNA (474bp) protein (158aa)
MarR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7229D
putative MarR family transcriptional regulator
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:BAK67427.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_500_bf_scaffold_684_29
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24244..24879)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035C4DA4
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:KJL31381.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Transcriptional regulator, PadR family
SCNpilot_cont_500_bf_scaffold_684_30
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25037..26587
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003808956 rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC64300.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
ABC-type dipeptide transport system, extracellular solute-binding protein rbh
Displaying items 1-30 of 59 in total

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